Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3968 ATGGCATCAACGGCAGCAGCACCAACCGCTTTCTCTCTCCTCCGCTCCACCACCACCTCCTCCACCACCACCGCCACATCCTCCTCCCGCGTCCACCTCTCGTCCACCTTCGGCGTCCGCCCACTCAGGCGGCTGGGATTCTCGGCGGCGGACCCGTTACTGGCGGTGAATGTTGCATCCAGAGTTGCGGCGGTGAGAGGGAAGGGAGTGAGAGCGGTGGCCGCGATGGCGAAGAAGAGTGTCGGAGACTTGTCCGCGGCGGAGCTCAAGGGGAAGAAGGTGTTTGTCAGGGCGGACCTCAATGTCCCTCTTGATGACAACCAGAACATCACCGATGATACCAGGATCCGTGCTGCCATACCCACCATCAAGCACCTTATTCAGAATGGTGCTAAAGTTATCCTTACCACCCACTTGGGACGGCCAAAGGGTGTCACTCCCAAATACAGCTTGGCACCTCTTGTACCCCGGCTCTCCGAACTCATTGGCATCCAGGTTGTCAAGGCTGATGACAGTATTGGTCCAGATGTAGAAAAGCTGGTGGCTTCTCTTCCAGATGGAGGTGTTCTACTTTTAGAAAATGTGAGGTTTTACCCTGAGGAAGAAAAGAATGACCCTGAGCATGCAAAAAAACTTGCCTCTCTAGCAGATCTGTATGTTAATGATGCCTTTGGTACTGCTCACAGAGCACATGCATCAACAGAGGGGGTCACTAAATACTTGAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGACTACCTTGTTGGGGCAGTATCAACCCCAAAAAGACCGTTTGCTGCCATTGTGGGTGGTTCCAAAGTTTCATCTAAAATTGGAGTGATTGAGTCACTTCTAGAAAAAGTTGACATCCTTCTTCTTGGTGGAGGAATGATCTTCACATTTTACAAGGCTCAAGGCCTCTCAGTGGGTTCATCCCTTGTAGAAGAAGATAAGTTGGAACTTGCTACAACACTAATTGCAAAAGCCAAGGCAAAGGGAGTGTCGCTCTTGTTACCTAGCGATGTGGTGATTGCAGACAAATTTGCTCCTGATGCAAACAGCAAGATCGTGCCATCATCTGCCATCCCTGATGGGTGGATGGGATTGGATATTGGTCCAGATTCCATTAAATCATTCAGTGATGCATTGGATACTACCCAAACCATCATATGGAATGGACCCATGGGAGTGTTTGAGTTTGACAAGTTTGCTGTTGGGACAGAGGCTATTGCAAAGAAGTTGGCTGACCTTAGTGGAAAGGGGGTGACAACTATTATTGGAGGAGGAGATTCAGTTGCAGCTGTGGAGAAAGTAGGAGTTGCTAGTGTCATGAGCCACATATCTACTGGTGGTGGTGCAAGTTTGGAGTTATTGGAAGGCAAAGAGCTTCCTGGTGTCCTCGCTCTCGATGAAGCCGTACCAGTCGCCGTGTAA 1443 0.499 MASTAAAPTAFSLLRSTTTSSTTTATSSSRVHLSSTFGVRPLRRLGFSAADPLLAVNVASRVAAVRGKGVRAVAAMAKKSVGDLSAAELKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILTTHLGRPKGVTPKYSLAPLVPRLSELIGIQVVKADDSIGPDVEKLVASLPDGGVLLLENVRFYPEEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSTPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATTLIAKAKAKGVSLLLPSDVVIADKFAPDANSKIVPSSAIPDGWMGLDIGPDSIKSFSDALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3968 480 PIRSF Pgk 74 479 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 CDD Phosphoglycerate_kinase 89 474 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 ProSitePatterns Phosphoglycerate kinase signature. 93 103 IPR015911 GO:0004618|GO:0006096
Lja3g3968 480 Gene3D - 263 450 IPR015824 GO:0004618|GO:0006096
Lja3g3968 480 PANTHER PHOSPHOGLYCERATE KINASE 3 475 - -
Lja3g3968 480 PANTHER PHOSPHOGLYCERATE KINASE 3 475 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 Hamap Phosphoglycerate kinase [pgk]. 83 474 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 SUPERFAMILY Phosphoglycerate kinase 83 474 IPR036043 GO:0004618|GO:0006096
Lja3g3968 480 Gene3D - 149 475 IPR015824 GO:0004618|GO:0006096
Lja3g3968 480 Pfam Phosphoglycerate kinase 86 464 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 187 202 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 215 237 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 450 467 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 110 132 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 269 288 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 427 438 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 246 268 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 88 104 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 PRINTS Phosphoglycerate kinase family signature 391 416 IPR001576 GO:0004618|GO:0006096
Lja3g3968 480 Gene3D - 47 147 IPR015824 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3968 Lja-Chr3 78173924 78178025 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3968 3 78173924 78178025 Lja3g3968 3 78173924 78178025 ECH