Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3957 ATGAAAATGGCTTCGACCTTATTATCAAAGATGCTTTTGGGTCCTCGCTTGGTTCACTCTTCCTCATTCCTCACTCACCAGCCTCGCGTTCTCTCTTCTTTATTCACTAAGCGGGTGTATTGTGTACGAGCTGTCCCAGCCTACACAACCCAAAACTCCAAAACCACTCGTTGGGCTTCGTGTATGGCTTCTTCCATAGTTGGTAGAAGGGCTACTTATTCAACACAATCTGTATCTACAAATGAGCCAGTTGTTTCTGTAGATTGGCTTTATGATAACCTAAAGGAGCCTGATATGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCCCTTTTCTTTGATGTAGATGGAATAGCTGATCGAACTACAAATTTGCCACACATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTTTCAGCCCTTGGCATCCAGAACAAAGATGACGTGGTTGTTTATGATGGAAAAGGATTATTTAGCGCAGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTTTGGGTATTGGATGGTGGCCTGCCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCTAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACAAGCAGTTGGCCCAATTACGTTTCAGACTAAATTTCAGCCACATCTTGTTTGGACCCTTGATCAGGTAAAGAAAAATATTGAGGAAAAAACTCACCAACAGCTAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGCACCAGAGCCCCGAAAGGGAATCAGAAGTGGTCATGTACCTGGAAGCAAGTGCATTCCTTTTAGCCAGTTATTAGATGGTTCGCAGACATTGTTACCAGCTGCTGAGCTTAAGAAGCGATTTGAACAAGAAGGCATCTCTTTGGAAAGCCCAGTCGTGACTTCATGTGGAACTGGCGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGTCTGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCACAATCTGATACACCTGTTGAAACTACACAAACGGAATCAAGCTAG 1155 0.4485 MKMASTLLSKMLLGPRLVHSSSFLTHQPRVLSSLFTKRVYCVRAVPAYTTQNSKTTRWASCMASSIVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPITFQTKFQPHLVWTLDQVKKNIEEKTHQQLDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFSQLLDGSQTLLPAAELKKRFEQEGISLESPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGAQSDTPVETTQTESS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3957 384 ProSiteProfiles Rhodanese domain profile. 270 377 IPR001763 -
Lja3g3957 384 PANTHER THIOSULFATE SULFERTANSFERASE 65 378 IPR045078 GO:0016783
Lja3g3957 384 ProSiteProfiles Rhodanese domain profile. 95 212 IPR001763 -
Lja3g3957 384 Gene3D - 76 219 IPR036873 -
Lja3g3957 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 256 379 IPR036873 -
Lja3g3957 384 CDD TST_Repeat_2 254 370 - -
Lja3g3957 384 ProSitePatterns Rhodanese signature 1. 119 130 IPR001307 GO:0004792
Lja3g3957 384 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 65 378 - -
Lja3g3957 384 ProSitePatterns Rhodanese C-terminal signature. 358 368 IPR001307 GO:0004792
Lja3g3957 384 MobiDBLite consensus disorder prediction 266 286 - -
Lja3g3957 384 CDD TST_Repeat_1 84 207 - -
Lja3g3957 384 Gene3D - 248 382 IPR036873 -
Lja3g3957 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 214 IPR036873 -
Lja3g3957 384 SMART rhod_4 85 209 IPR001763 -
Lja3g3957 384 SMART rhod_4 253 374 IPR001763 -
Lja3g3957 384 Pfam Rhodanese-like domain 86 205 IPR001763 -
Lja3g3957 384 Pfam Rhodanese-like domain 255 370 IPR001763 -
Lja3g3957 384 MobiDBLite consensus disorder prediction 266 293 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3957 3 77927336 77940596 Lja3g3957 3 77927336 77940596 ECH