Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3938 ATGGCGACGTCGAACAAGATCGAACGCGGTCACCAGATGTACCGTGACGGACGATACAGCGAGGCGTTAGGGTTTTACACGGAGGCGATCGCCATGGCCAAGACCAATCCTCAGAAGATCGCTTTGCATAGCAATCGTGCTGCTTGCTTCCTCAAGCTTCACCATTTCAACAAGGCAGCAGAAGAGTGCACCTCAGTGCTTGAGCTTGATCACGAGCACAGTGGAGCTTTGATGCTGCGAGCTCAAACACTGGTGACCTTGAAGGAGTACCATTCAGCACTTTTCGATGTCAATAGACTCTTGGAATTGAATCCAGACTCAGAGGTCTATCAAAATCTTCACGCCCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAAGGAGATGAGGAGGCTGAGCTGATGCTAAATAGAGATAATAAGAAGAAAGAGATGTTTGCTGCAATATCTAATATTAGGATTGATCAAAAGGATGAGCTTGGAAAAACTTTTATCGGTTCTGAGCGTGCTCCTCAGGAAATAGACCAAAATTCTTCATTTAAACAAGAAAGGGACCAAAACTATGAACCTAAAATGACCACAGTGGAAGTTATGGTTCCTAAAGCACCAAGCAAAGAATCAACTGAGAAGCAGTCCGAAGGATGGCAAACAATTCCAAAACCTAAAGGACATTCTACTCTAGACTACGCACGGTGGGACAATGTTGAAGATGATTCTAGTGAAGAAGAAGATGATGATGATGATGAAGATGAAGAATCTTTGCCCCAATACCGGTTTCGTGTGAAAACAGTTGGTGTGCGTCCTGTGAAGTGA 840 0.4464 MATSNKIERGHQMYRDGRYSEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHHFNKAAEECTSVLELDHEHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPDSEVYQNLHARLKTQLSLAPIPESEEEFEEQGDEEAELMLNRDNKKKEMFAAISNIRIDQKDELGKTFIGSERAPQEIDQNSSFKQERDQNYEPKMTTVEVMVPKAPSKESTEKQSEGWQTIPKPKGHSTLDYARWDNVEDDSSEEEDDDDDEDEESLPQYRFRVKTVGVRPVK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3938 279 Gene3D Tetratricopeptide repeat domain 2 123 IPR011990 GO:0005515
Lja3g3938 279 SUPERFAMILY TPR-like 8 120 IPR011990 GO:0005515
Lja3g3938 279 MobiDBLite consensus disorder prediction 172 279 - -
Lja3g3938 279 MobiDBLite consensus disorder prediction 244 261 - -
Lja3g3938 279 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 279 - -
Lja3g3938 279 SMART tpr_5 74 107 IPR019734 GO:0005515
Lja3g3938 279 SMART tpr_5 3 36 IPR019734 GO:0005515
Lja3g3938 279 SMART tpr_5 40 73 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3938 3 77563974 77565800 Lja3g3938 3 77563974 77565800 ECH