Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3917 ATGCTGGACATGGATGTGTTTGGAGGTGGGGGTGATGTGCAATCGGGGGATGTTCCAACGGAAGGTGAAGTTTTTGATGCATCACAATATGCATTTTTCGGTAAAGATGTTTTGGAGGAAGTTGAGTTGGGCGGGCTAGAAGATGATGACTTATTGCCTGAGTCTAATGAGGAGGAGTTCCTTCTTAACAGAGAAGAGGCTGAGGATATAAAATCTCTTTCTGATATTGATGATCTAAGTACCAATTTTTGGAAGTTGAACAAGGTTGAAAGTGGACCAAAATCTGCAGCAGTTATTGGTGATCAGGGTTCAAGAGAAAATTCTACAGCTGAATGGGCAAACAGGAATGACGTTCAGAACTGGTTTGAACAGAGTGCTTATGACAGTGAAGGTTCTCTGGATGGCAGAAGATTGTCATCACAACCTTATTCTTCTCTTTCTCATTTACCTGAACCAAAGCCCTTGTACAGAACTGCTTCATATCCGGAACAGCAAAGGCAGCAACAACATCACCTACAGCATGGCCCTGGTGAATCAGTTCCTAATTGGTTTGATCAGCATGCATATGATTCTGAAACTACTCAAGATGGAAAACGATGGTCATCACAGCCACATTCCTCCATTGCACACTTGGAAGAATCGAAGTCCTTGTACAGAACATCTTTATATCCTGAGAAGCAGCAGGAGCATCCTCATTTTTCTAGCGAACCAGTTTTGGTGCCAAACTCTTCATTTACTTCTTATCCTCCACCTGGTGGTAGATCTCAGCAGGGTTCTCCTAGCAATAATACAGGCTACTTAAATATTCCTCATAATGCTATAGGAGCTCAGATGGCACTATCTTCTCAAAATCGTTCGCGTTTCTCCAATCCTGCGCTACAGTTGGGTGGATTAAACCATGGGCTACCTTTTAGTGGCAACATGAACCAATTTCCTACTGGTTCCCCGTTTAACCAGCGAATCCAGAATCAATTGGTCAACCAGGCAGGGTTTTATTCTGGAGATCATCCCAATTTTTCCTCAGGTTTACCCATGCTTAACAAATATGATCAGATGTTGGGGATAATGGAACTGAGGGATCAATTACCAAAATCAGCTCTCCTAGGTAGGCAGAATCTCCGGTTTCCCCCACAGGGTTTTGATTTGAGTTTCAATAGAAGCAATAATGGGTGGCCCCGATTTAGGTCTAAGTATATGACAACTGAGGAAATTGAGAATATCCTTAGAATGCAGCTTGCAGCAACACATAGTAATGATCCATATGTAGATGATTATTACCACCAAGGTTGTCTAGCGAAAAAATCTGCAGGGGCTAAACTGAGGCATCACTTCTGTCCAAATCAAATAAAGGAACATCCTCTACGAGGCTCTGCTAATACTGAACAACATGCTTTTCTCCAGGTTGATGCTCTAGGGAGAGTTCCATTCTCATCAATTCGCAGGCCTCGTCCTCTTCTGGAAGTTGATCCACCAAATTCTTCTCGTGCTAGCAGCCCTGAGCAAAACGTTTCAGAGAAGCCCCTTGAACAGGAGCCCCTGCTGGCAGCAAGGGTTACAATTGAGGATGGTCTTTGTCTTCTTCTTGATGTAGATGATATTGACCGTTTCCTACAGTTTAATCAGCTTCAAGATGGTGGAATTCAACTAAAACACAAACGTCAGGGTCTTTTGGAAGGACTTGCAGCCTCACTTCATTTAGTTGACCCACTCGGAAAGAGTGGACATACAGTTATGCATGTGGCAAACGATGATGTTGTTTTTCTCAGGATAGTTTCTCTACCCAAGGGTCGAAAGCTTCTTGCTAGGTACCTTCAAATACTATTTCCTGGGGGTGAGCTTATGCGAATAGTCTGCATGGCCATCTTTCGTCATTTCAGATTCTTATTTGGTGGCCTTCCCTCTGATCCAGTTGCAGCAGAGACCGTGAGTAACCTTGCAAGGGTTGTTTCCAAGTGCCTCCGTGAAATGGATCTGGGTGCACTTAGTGCTTGTCTAGCAGCACTTGTTTGTTCTTCAGAGCAGCCACCTCTACGTCCCCTTGGAAGCCCTGCTGGAGACGGGGCTTCCCTTATTTTAGTATCTGTGCTTGAGAGGGCTACTGAACTGCTCACTGATCCTCATGCTGCAAGCAACTATAATATCGCAAATCGTTCTCTTTGGCAGGCTTCATTCGATGAATTTTTTGGTCTTCTCGCCAAGTATTGTGTGAATAAATATGATAGTATCATGCAATCATTCCTTAATCAAGGGACACCAAATATGGCTGTAATTGGGTCAGAAGCTGCTAGAGCAATTAGCAGGGAAATGCCAGTTGAGCTTTTGCGTGCAAGTCTGCCTCACACAGATGATCGCCAGAAGAAGATATTACTTGATTTTGCTCACCGCTCTTTACCTGTAGTTGGGTTTAACAGTAGTGCTGGGGGTAATGGTAACCATGTGAACTCAGAGTCAGTGCTGAGTTAA 2463 0.4385 MLDMDVFGGGGDVQSGDVPTEGEVFDASQYAFFGKDVLEEVELGGLEDDDLLPESNEEEFLLNREEAEDIKSLSDIDDLSTNFWKLNKVESGPKSAAVIGDQGSRENSTAEWANRNDVQNWFEQSAYDSEGSLDGRRLSSQPYSSLSHLPEPKPLYRTASYPEQQRQQQHHLQHGPGESVPNWFDQHAYDSETTQDGKRWSSQPHSSIAHLEESKSLYRTSLYPEKQQEHPHFSSEPVLVPNSSFTSYPPPGGRSQQGSPSNNTGYLNIPHNAIGAQMALSSQNRSRFSNPALQLGGLNHGLPFSGNMNQFPTGSPFNQRIQNQLVNQAGFYSGDHPNFSSGLPMLNKYDQMLGIMELRDQLPKSALLGRQNLRFPPQGFDLSFNRSNNGWPRFRSKYMTTEEIENILRMQLAATHSNDPYVDDYYHQGCLAKKSAGAKLRHHFCPNQIKEHPLRGSANTEQHAFLQVDALGRVPFSSIRRPRPLLEVDPPNSSRASSPEQNVSEKPLEQEPLLAARVTIEDGLCLLLDVDDIDRFLQFNQLQDGGIQLKHKRQGLLEGLAASLHLVDPLGKSGHTVMHVANDDVVFLRIVSLPKGRKLLARYLQILFPGGELMRIVCMAIFRHFRFLFGGLPSDPVAAETVSNLARVVSKCLREMDLGALSACLAALVCSSEQPPLRPLGSPAGDGASLILVSVLERATELLTDPHAASNYNIANRSLWQASFDEFFGLLAKYCVNKYDSIMQSFLNQGTPNMAVIGSEAARAISREMPVELLRASLPHTDDRQKKILLDFAHRSLPVVGFNSSAGGNGNHVNSESVLS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3917 820 MobiDBLite consensus disorder prediction 491 505 - -
Lja3g3917 820 MobiDBLite consensus disorder prediction 130 184 - -
Lja3g3917 820 MobiDBLite consensus disorder prediction 482 508 - -
Lja3g3917 820 MobiDBLite consensus disorder prediction 160 175 - -
Lja3g3917 820 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 209 820 IPR039900 GO:0000290
Lja3g3917 820 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 14 156 IPR039900 GO:0000290
Lja3g3917 820 MobiDBLite consensus disorder prediction 224 266 - -
Lja3g3917 820 MobiDBLite consensus disorder prediction 237 266 - -
Lja3g3917 820 PANTHER II-ASSOCIATED PROTEIN PAT1, PUTATIVE-RELATED 180 211 - -
Lja3g3917 820 PANTHER II-ASSOCIATED PROTEIN PAT1, PUTATIVE-RELATED 209 820 - -
Lja3g3917 820 PANTHER II-ASSOCIATED PROTEIN PAT1, PUTATIVE-RELATED 14 156 - -
Lja3g3917 820 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 180 211 IPR039900 GO:0000290
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3917 Lja-Chr3 77092749 77099859 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3917 3 77092749 77099859 Lja3g3917 3 77092749 77099859 ECH