Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3886 ATGGAAGATAATAATAATAATGATAAATGGCGTTACTATGATCATGATGACCCTCTTCTTCTTCTCACAGACGCTTCTTTTCAACAAGAAACTTCTCCCAATCAGTTTTCAGAAACTCCACTGAGCTCGCAGAATTCGGCTATGGCGGTTGATCCTCAATCTCATGGTGGCAGCCCATGTTACGGAGGATCTACATTAGGGTTTTCTCTGGCTTCCCCAGATATGGTAATCTGTGGTGGCTCACCTGATATTGGTGGAATCAGCTATGTTGAATCTCCTGAGTTGTTGAAGAGAGAAAATTATAAGAAATTGGAGTCATCTATGGAGCTTTCTCTAGAGAATGGCATCAATGGGGCTGAAGTTGAAGTTTATAATGGCCATAAGACCCCAACTGTTAAATTCTCTAATTTGTGTCAAACTTTTGAACCAGAGGAAGAGCTTCTACCCCCTCAAGCCTCCTTTGAGCTTCTTCCGCCGCCTGTGACCAAGGATGAGTCTCCCCAAGCCTACCCTTCTAGAGATAGTGAAGTGCTAGAAGATGCTGAGCTGTCTCAGGAGGAAGAATTGGAGCCCTTAGAAGATGCCACGGATATTGGGGTGGAAGAGAGATTTCAGAAGCTGAAAAGAGGGTTTGAGTGTCAGAGAAAGGAGCTGGCAGAAACTAGAAGAGAGTTGAGGGAGGTCAAGAGGGAGAATGAACATAAGAGTAAAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCAATGCATGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAAGAGAAAAGCAGGTGGTTTTCATCAATGAGAGACTTGGTGAGGAAATTGAAGATTATGAAAATGGAACACATAAAGCTATTAGAGGAAGCAGAGGCATACAAGAAATTTGAAGCAGATATAAATCAAATGGGGCTATTCATCAAGAACCAAATTAATGAACAATTGGAGTCACATGAAGATCTCAAGTCAAAATATATTGAAGGGGCTAAGGAGCGGAAAGAGCTCTACAATAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTCTGCCGGTGTAGGCCGCTCAATGCAGAAGAGATAAAAGCAGGAGCCTCAATGGCCTTAGATTTTGATTCTGCCAAAGATGGTGAGCTTACTGTAATGTCAAATGGAGCTCCCAGAAAGAATTTTAAGTTTGATGCTGTCTTTGGTCCTCAAGCTGAACAAGCCGATATTTTTGAAGACACTGCACCATTTGCAACCTCAGTTTTAGATGGGTACAATGTATGCATTTTTGCATATGGACAGACGGGGACAGGAAAAACTTTCACAATGGAGGGCACAGAAGAGGCTCGTGGAGTTAATTTTAGGACTCTTGAGAAAATGTTTGACATAATCCACGAGAGAAAGACACTTTACCGTTATGATATCTCTGTAAGTGTCTTAGAGGTGTACAATGAGCAGATAAGAGATTTACTGGTTTCAGGAAATCAGCCAGGAATGGCTGCAAGAAGATTGGAAATAAGACAAGCTGGTGAAGGAATGCATCACATTCCGGGGCTGGTTGAGGCACAAGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGTTCAACCAATGCCAACGAGCACAGCAGCCGATCCCACTGCATTCACTGTGTTATGGTTAAGGGGGAGAATTTGTTGAATGGGGAACACACAAGGAGCAAGATGTGGCTGGTGGACCTAGCGGGCAGTGAGCGAGTTGCAAAGACAGAAGTGCTCGGCGATAGACTGAAGGAGACGCAGAATATTAATCGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACTAAAAGTTCACACATCCCTTTCAGGAACTCCAAGCTTACTCATTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTCCAGATTAGTCCTAATGAAAATGATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTCGAGTAAGGGGAATAGAGTTAGGCCCTGCAAAAAAGCACAAACAAGAGATGGCTGAGAAAACCAAACAAGAGGTGAAGCTGAAGGATTTCCAAATCAAGAAGATGGAAGAAGCAATCCATGGATTAGAGTCCAAGATGAAAGAAAGAGATACTAAAAACAAAAACCTGCAAGACAAGGTCAGGGAACTGGAATCACAGCTTCTGATTGAAAGAAAGCTAGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAAACATCAAGAAGAGCAGAACAACGCACTTATGAGACCAGTACTTGCAAACCGACCTGTAGGAAATCTCAAGAGTTTCAATGATCCAGCTAGACCACTCATGGAGAACAACATCTTAAAACCTATTATACCCTTTTCTACAATGGAGAGCTCCACCAAGTACATTGATCACACTGAGAAAGAAAACAATCCTGACATGGCCGAAAAAGGGCTACTTCCGAAAAGGACCGGAAGAGCCTCTATCTGCACAATGACACCGCGCGTTCCTTCAGCCACTGCTTTAAGGCGCAACTCCCTGATTCCTCTCCCTAGCTTAACACAGTTTCCAACACCATTGTTACCCAAGTTAACAAAACAAGCTGATCAAAAAGATGTCAATGGGGAATCAGAATCCAGCTGTTTGCCTGCACAGACTCACTGTGAGAGTCCCAAAGAAGTAAGAATTGGTGTTAAGAAGATGAGTGGCACACAAAGAAGAAGCCTGAATAAGAAAATGCAGGTAAAGTCTCCACTGCAACACTTGAGAAAGGTTGGTGTAGGAGTGGAGAAAGTTAGAGTTTCCATTGGAAGTAGAGGGAAACTGGGGCAAAGGGTGCAACCCGGAAGTGGTAGAAGAGGTGGAGCTAAAGAGCAAAAGAATGCTCAGAAGGAGAAGGAGAGGGGATGGATATGA 2970 0.4343 MEDNNNNDKWRYYDHDDPLLLLTDASFQQETSPNQFSETPLSSQNSAMAVDPQSHGGSPCYGGSTLGFSLASPDMVICGGSPDIGGISYVESPELLKRENYKKLESSMELSLENGINGAEVEVYNGHKTPTVKFSNLCQTFEPEEELLPPQASFELLPPPVTKDESPQAYPSRDSEVLEDAELSQEEELEPLEDATDIGVEERFQKLKRGFECQRKELAETRRELREVKRENEHKSKECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSMRDLVRKLKIMKMEHIKLLEEAEAYKKFEADINQMGLFIKNQINEQLESHEDLKSKYIEGAKERKELYNKVLELRGNIRVFCRCRPLNAEEIKAGASMALDFDSAKDGELTVMSNGAPRKNFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIHERKTLYRYDISVSVLEVYNEQIRDLLVSGNQPGMAARRLEIRQAGEGMHHIPGLVEAQVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTRSKMWLVDLAGSERVAKTEVLGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKHKQEMAEKTKQEVKLKDFQIKKMEEAIHGLESKMKERDTKNKNLQDKVRELESQLLIERKLARQHVDSKIAEQHQMKHQEEQNNALMRPVLANRPVGNLKSFNDPARPLMENNILKPIIPFSTMESSTKYIDHTEKENNPDMAEKGLLPKRTGRASICTMTPRVPSATALRRNSLIPLPSLTQFPTPLLPKLTKQADQKDVNGESESSCLPAQTHCESPKEVRIGVKKMSGTQRRSLNKKMQVKSPLQHLRKVGVGVEKVRVSIGSRGKLGQRVQPGSGRRGGAKEQKNAQKEKERGWI* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3886 989 MobiDBLite consensus disorder prediction 24 52 - -
Lja3g3886 989 Pfam Kinesin motor domain 363 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3886 989 PRINTS Kinesin heavy chain signature 553 570 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3886 989 PRINTS Kinesin heavy chain signature 633 654 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3886 989 PRINTS Kinesin heavy chain signature 584 602 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3886 989 PRINTS Kinesin heavy chain signature 431 452 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3886 989 PANTHER KINESIN-LIKE PROTEIN KLP-3 191 976 - -
Lja3g3886 989 Coils Coil 710 751 - -
Lja3g3886 989 MobiDBLite consensus disorder prediction 975 989 - -
Lja3g3886 989 MobiDBLite consensus disorder prediction 23 56 - -
Lja3g3886 989 ProSitePatterns Kinesin motor domain signature. 583 594 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja3g3886 989 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 191 976 - -
Lja3g3886 989 MobiDBLite consensus disorder prediction 954 989 - -
Lja3g3886 989 Coils Coil 211 238 - -
Lja3g3886 989 Gene3D Kinesin motor domain 301 685 IPR036961 -
Lja3g3886 989 MobiDBLite consensus disorder prediction 154 173 - -
Lja3g3886 989 CDD KISc_C_terminal 355 685 - -
Lja3g3886 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 717 IPR027417 -
Lja3g3886 989 SMART kinesin_4 355 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja3g3886 989 ProSiteProfiles Kinesin motor domain profile. 357 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3886 Lja-Chr3 76603924 76608963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3886 299 689 Calmodulin-binding Proteins AT5G65930 42.462 1.43e-79 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3886 3 76603924 76608963 Lja3g3886 3 76603924 76608963 ECH