Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3879 ATGGAAGATGAGGTGATTCTGTTAAATTTCTGGCTTAGCCCTTATGGGATGAGGGTCCGGATTGCGCTCGAGGAAAAGGGCATCAAGTATGAGAACAGGGAAGAGGACTTCAGCAATAAGAGCCCTTTACTCTTACAAATGAACCCAGTTCATAAGAAAATACCAGTCCTCATCCACAATGGCAAACCCATCTGTGAGTCACTCATTGCTATTGAGTATATAGATGAGGTTTGGAATCATCAATCTCCACTGTTGCCTTCTGATCCTTACCAGCGAGCCCAAGCTAGATTCTGGGCTAATTACATTGACACTAAGATATATGTGGTTGCAATGAAATTCTGGAAAACTGAAGAAGAGGAGGAGAAAGAAGCTGCTAAGAAAGAGTTGCTTGAGCGTCTTAAATTGCTGGAAGAACAGCTGGGAGACAAACCCTTTTTTGGTGGAGACAACCTTGGTTTTGTGGATGTGGCACTTGTTCCTTTGTTCTGTTGGTTATATACCAATGCTTTACGTGGATCTTTCATCGATGAAATCCAGTATCCCAATATCATTGCTTGGGTCAAGAGGTGTGCTGATAAAGAGAGTGTGTCCAAGTCTTTTCCAGATGAGAACATGATCAAACGTTTTGCCGAAGAGAGACGACTTTTACGTCAAGGAAAATAG 663 0.4238 MEDEVILLNFWLSPYGMRVRIALEEKGIKYENREEDFSNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAIEYIDEVWNHQSPLLPSDPYQRAQARFWANYIDTKIYVVAMKFWKTEEEEEKEAAKKELLERLKLLEEQLGDKPFFGGDNLGFVDVALVPLFCWLYTNALRGSFIDEIQYPNIIAWVKRCADKESVSKSFPDENMIKRFAEERRLLRQGK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3879 220 SFLD Main.3: Omega- and Tau-like 2 213 IPR045073 -
Lja3g3879 220 SUPERFAMILY GST C-terminal domain-like 76 212 IPR036282 -
Lja3g3879 220 Gene3D - 85 219 - -
Lja3g3879 220 CDD GST_N_Tau 5 78 - -
Lja3g3879 220 SFLD Glutathione Transferase (cytosolic) 2 213 IPR040079 -
Lja3g3879 220 Coils Coil 119 139 - -
Lja3g3879 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
Lja3g3879 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 209 IPR010987 -
Lja3g3879 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 210 - -
Lja3g3879 220 Gene3D Glutaredoxin 1 84 - -
Lja3g3879 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lja3g3879 220 Pfam Glutathione S-transferase, C-terminal domain 101 192 IPR004046 -
Lja3g3879 220 CDD GST_C_Tau 89 202 IPR045074 GO:0004364|GO:0006749
Lja3g3879 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lja3g3879 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3879 Lja-Chr3 76469140 76469919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3879 1 214 Glutathione S-transferase Gene Family AT1G17180 59.346 4.09e-91 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3879 3 76469140 76469919 Lja3g3879 3 76469140 76469919 ECH