Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3878 ATGGCTGACGAGGTGGTTCTTCTTGATTTCTGGGCAAGTCCATTTGGAATGAGAGTCAGAATTGCACTTGCTGAAAAGGGTATCAACTATGAGTACAAAGAAGAGGATTTGAGGAACAAGAGTCCTCTACTCCTCCAATCGAACCCTGTTCACAAGAAGATTCCAGTTCTCATCCACAATGGAAAACCCATTGCTGAATCTCTGATCGCTGTTCAGTATATTGATGAGGTCTGGAATGATGCATCTCCCTTGTTGCCTTCTGATCCTTACCAGAGAGCTCAAGCTAGATTCTGGGCTGATTATGTTGATAAGAAGATATATGAAATTGGTAGGAACATAATTTGGAAGAAAAATGAAGAAAGAGAAGCTGCCAAGAAGGAATTCATAGATTGCCTCAAGTTGCTGGAGGAACAGCTCGGAGACAAGACTTACTTCGGAGGAGACAAGCTTGGGTATGTTGATATAGCACTTGTTCCATTCTACACTTGGTTTAAAGGCTATGAGACCCTTGGCAACTTCAACATAGAGAGTGAGTGCCCCAAGCTCATTGCTTGGGCCAAGAGATGCCTGCAGAAAGAGAGCGTTTCAAAGTCTCTCCATGACCAAGACAAGATCTATGAGTTCATTGTGGAAATCAGAAAGAAGTTAGGCATCGAGTAG 660 0.4303 MADEVVLLDFWASPFGMRVRIALAEKGINYEYKEEDLRNKSPLLLQSNPVHKKIPVLIHNGKPIAESLIAVQYIDEVWNDASPLLPSDPYQRAQARFWADYVDKKIYEIGRNIIWKKNEEREAAKKEFIDCLKLLEEQLGDKTYFGGDKLGYVDIALVPFYTWFKGYETLGNFNIESECPKLIAWAKRCLQKESVSKSLHDQDKIYEFIVEIRKKLGIE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3878 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lja3g3878 219 CDD GST_N_Tau 5 78 - -
Lja3g3878 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lja3g3878 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
Lja3g3878 219 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Lja3g3878 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Lja3g3878 219 Gene3D - 88 219 - -
Lja3g3878 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Lja3g3878 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Lja3g3878 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Lja3g3878 219 Gene3D Glutaredoxin 1 87 - -
Lja3g3878 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Lja3g3878 219 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Lja3g3878 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3878 Lja-Chr3 76463543 76466054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3878 1 216 Glutathione S-transferase Gene Family AT1G78380 68.519 5.31e-112 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3878 3 76463543 76466054 Lja3g3878 3 76463543 76466054 ECH