Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3849 ATGACCGACGACGAAAAACCCAGAGGTTTCTCCGGCTCCGGCTCCGGCTCCGGCGAGCCTCACCACCCTCCTCCACCGCAGCCCCTTCCCTATCCGCCGCCTCAATACGGCACCTTCCAAGGCGTCTCCAACTACCCTCCTCCCCGGCCAGGCCCTCACCCCGCCATCGGCTTCCCTCAGCCCGTCCCGCCTCCCGGCGCCGGCGGCCCATCCGCCCCTCCTCCGCCGTATCTCCCTCACGGGGGCTACCAAGCTGTTACCGGTTATGCAATTGCTGAAGGAAGACCTGTGAGAGAAAGGCGCCTTGGTTGCTGTGGTATTGGTTGCGGGTGGTGCCTGTTTATATTAGGTTTCTTTCTTGGTGGTATTCCATGGTATGTTGGGGCAATAATTATGCTTTGTTCCAGAGTAGACTATCGAGAGAAACCCGGATATATTGCTTGTATAGTTGGTGCTGTTCTGGGCACAATTGCCATTATTGTTGGAGCCACAAAGGGAGCAGACGACTGGTAA 513 0.577 MTDDEKPRGFSGSGSGSGEPHHPPPPQPLPYPPPQYGTFQGVSNYPPPRPGPHPAIGFPQPVPPPGAGGPSAPPPPYLPHGGYQAVTGYAIAEGRPVRERRLGCCGIGCGWCLFILGFFLGGIPWYVGAIIMLCSRVDYREKPGYIACIVGAVLGTIAIIVGATKGADDW* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3849 170 MobiDBLite consensus disorder prediction 45 77 - -
Lja3g3849 170 SUPERFAMILY beta-sandwich domain of Sec23/24 20 76 - -
Lja3g3849 170 MobiDBLite consensus disorder prediction 19 35 - -
Lja3g3849 170 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 22 170 IPR044804 -
Lja3g3849 170 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3849 Lja-Chr3 75756344 75759993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3849 36 170 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.690 2.50e-23 89.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3849 3 75756344 75759993 Lja3g3849 3 75756344 75759993 ECH