Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3806 ATGGGGTTCTTAAACATGAAGAAAAAATGGATCTTTCCTATCATCATGACCTCTGCTTTTTGTATTCTCTTTCTAGCCACATCCTTGTACATAGGCCTTGTATCTTCAATTCACTCCATCAATTCACTATTCTTCTTTCTCCCATCACATTCACAACCAAACCAAACTTCCCTCCCATTTGTGGAGAGGAAGATTTCTCCTGCTCTGGCTCCTTCTAAGCCTGCAATTCCGCGTTTTGCGTATTTGATCGCCGGCTCCAAAGGTGATTTGGATAAGCTTTGGAGAACACTTCTCGCGCTTTACCATCCGCTAAACCATTATGTTGTTCATTTGGACCTTAAATCGCCCTTAGAAGAAAGGTCGGAGCTTGCTTCTAGAGTTGAGAAACAGCCTGTCTTCTCAGAGGTTGGAAATGTTTTTGTAATTACAAAGGCTAATATGGTAACCTATAGAGGACCGACGATGGTTGCTAATACTCTTCATGCTTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGACTGGTTTATTAATCTTAATCTACTATATACTTTTTCGAATTTAGATAGAGGCCTTAACTTCATTGAGCACACGAGTCGGTTAGGATGGAAGCGGGATAAACGAGCAATGCCTTTAATTATAGACCCTGGGCTTTACATGTCAACCAAGTCTGATGTATTTTGGGTCAATCCTAAGAGAACTTTGCCAACTGCGTTTAAACTATTCACTGGTTCAGCATGGATGGTTTTATCGCGTGAATTTGTTGAATATGTTGTCTGGGGTTGGGATAATCTGCCAAGGACCCTTCTCATGTACTACTCTAATTTCATATCTTCCCCTGAAGGCTACTTTCAGACAGTTGCATGCAATGTGCCAGAATTAGCGAAAACCGTTGTCAACAGCGACATGCATTATATTTCCTGGGACAATCCTCCTAGACAGCACCCTCACGTCCTTAACATCAACTACACTGAAAAAATGATTGCAAGTGGTGCTGCATTTGCCAGAAAATTTAAGCAAGATGACCCAGCCCTGGATTTGATTAATAAAAAATTCCTACGCCGGAGAAATGGACTATTCACACTCGGCGGGTGGTGTTCCGGTAAACCCAAGTGTACCGAGGTTGGGAACATTTATAAACTCAAACCTGGTCCGGGATCTCAGAGGCTTCAGCGCCTTGTAGCTGAGCTAACATTGAAGGCTCAATCTGGTCGTGATCAGTGTAAGTAG 1230 0.426 MGFLNMKKKWIFPIIMTSAFCILFLATSLYIGLVSSIHSINSLFFFLPSHSQPNQTSLPFVERKISPALAPSKPAIPRFAYLIAGSKGDLDKLWRTLLALYHPLNHYVVHLDLKSPLEERSELASRVEKQPVFSEVGNVFVITKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLNLLYTFSNLDRGLNFIEHTSRLGWKRDKRAMPLIIDPGLYMSTKSDVFWVNPKRTLPTAFKLFTGSAWMVLSREFVEYVVWGWDNLPRTLLMYYSNFISSPEGYFQTVACNVPELAKTVVNSDMHYISWDNPPRQHPHVLNINYTEKMIASGAAFARKFKQDDPALDLINKKFLRRRNGLFTLGGWCSGKPKCTEVGNIYKLKPGPGSQRLQRLVAELTLKAQSGRDQCK* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3806 409 PANTHER GLYCOSYLTRANSFERASE 4 409 IPR044610 GO:0015020
Lja3g3806 409 PANTHER OS01G0201100 PROTEIN 4 409 - -
Lja3g3806 409 Pfam Core-2/I-Branching enzyme 79 327 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3806 Lja-Chr3 74978601 74981019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3806 1 409 Glycosyltransferase AT3G15350 63.679 0.0 581
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3806 3 74978601 74981019 Lja3g3806 3 74978601 74981019 ECH
Lja3g3806 3 74978601 74981019 Lja3g4826 3 90280858 90285654 PCT