Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2646 ATGAAGCTGCTTCCAACGCTCCTCATGAGGTCCCTCTCAACGTGTTCTTTGCCTGCTACTACAACCGCCCTTCAAGAAATTGCTTCATTTCAACCCAAAGGTGTTGCAAAGGTTGTTCTGAAAAAGGGGAAGACACAACTCTTCAAGGATGGAAACCCAATGGTGTACAGCGGAGCCGTTGATAGAATTATTGGGAGGCCGCCTCCGAAGACTGGAGATATTGTTGTGGTAGCAGATGGGACTGAGAAGCCAATAGGATGGGGCTTGTACAACTCAGTTTCTATGTTCTGTGTTCGGCTTATGCAGTTTGAGGATGAAGCTATCAGCGATTCATCATTTCCATTGAACATGGAAAAACTGCTTGAAACTAGAATTCATGCTGCCGTTGAATTGCGTAGAAGGCTGGGTCTTCCTTCAGTCCATACAAATGCATATCGTTTAATCAATAGTGAGGGTGACAGATTATCAGGATTAATAATTGATGTCTTTGGAGATGTAGCTGTGGTAGCATCATCTGCTGCTTGGGTTGAGAAGTACAAGTCAGAGATAGAGGCATGCATCAGGAAAATTGATTATATCAATTATATAAATTGGAGGCCATCTATTGATATATTAAAGGAAGATGGAGTTGATGTGTCTGATTTAGAGGATTTGAATTCATCTACTTGTCCTGAAAGAACAAAGATCATGGAAAATGGAATTGTGTACACAATTTCACTGAACGGCCAGAAGACTGGATTCTATGCAGATCAGCGTGAGAATCGTCAATGTATATCAAGTATATCAGATGGTCAAAAGGTTCTTGATCTATGTTGCTATAGTGGTGGTTTTGCTTTAAACGCAGTGACTGGAGGTGCTCTTGATGTTACTGGTGTTGACACATCACTACCAGCTCTAGAGCTTGCTAAAGAAAATGTTGTACTTAACAACATTGATCCAGGAAGAATATCCTTTTTGAAACAAGATGCAACAAAGTTTATGAAGAATGCTCTCTTGAGAGATGAATCCTGGGATATTGTCATCATTGATCCTCCTAAAATGGCACCATCAAAAAAGGTTCTACATAGTGCATCTGGTATGTACAGAAGTATGAATTCGCTTGCGATGCAACTTACAAAAAGAGGTGGTCTTCTGATGACCTGTTCTTGTTCTGGAGCTGTGACCCAGAGTGGGATATTCCTGCGTATCCTTCAGGGTGCAGCATCTATGGCAGGGAGGAAAATCACTGTTCTAAGACAGGCTGGAGCAGCTTGTGATCATCCTATTGATCCGTCATACCCAGAAGGCGCATACCTATCCAACGTTCTATTAAGAGTTTCATGA 1323 0.4172 MKLLPTLLMRSLSTCSLPATTTALQEIASFQPKGVAKVVLKKGKTQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVVVADGTEKPIGWGLYNSVSMFCVRLMQFEDEAISDSSFPLNMEKLLETRIHAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFGDVAVVASSAAWVEKYKSEIEACIRKIDYINYINWRPSIDILKEDGVDVSDLEDLNSSTCPERTKIMENGIVYTISLNGQKTGFYADQRENRQCISSISDGQKVLDLCCYSGGFALNAVTGGALDVTGVDTSLPALELAKENVVLNNIDPGRISFLKQDATKFMKNALLRDESWDIVIIDPPKMAPSKKVLHSASGMYRSMNSLAMQLTKRGGLLMTCSCSGAVTQSGIFLRILQGAASMAGRKITVLRQAGAACDHPIDPSYPEGAYLSNVLLRVS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2646 440 SMART pua_5 36 122 IPR002478 GO:0003723
Lja3g2646 440 Gene3D PUA domain 35 106 IPR036974 GO:0003723
Lja3g2646 440 SUPERFAMILY PUA domain-like 37 107 IPR015947 -
Lja3g2646 440 Gene3D RNA methyltransferase domain (HRMD) like 117 220 - -
Lja3g2646 440 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 20 439 - -
Lja3g2646 440 CDD RlmI_M_like 120 209 - -
Lja3g2646 440 CDD AdoMet_MTases 266 381 - -
Lja3g2646 440 Gene3D Vaccinia Virus protein VP39 227 440 IPR029063 -
Lja3g2646 440 ProSiteProfiles PUA domain profile. 35 91 - -
Lja3g2646 440 Pfam PUA-like domain 38 102 IPR041532 -
Lja3g2646 440 Pfam S-adenosylmethionine-dependent methyltransferase 223 396 IPR019614 GO:0008168
Lja3g2646 440 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 436 IPR029063 -