Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2645 ATGGTTTCTCTCAAGGGAAAATCTAGGGTTGACTCAACTCGAGTCTCCGTTGGTGGCCAATCTCGTCCAAGTGTTGGTGGTAGGAATTTCAAGATTTATTCGGGAACTGACCGGATCAAAGTCGGAGAAGGACTCATGACATCTACTGGAGAAGCTAGAGAAACAGGTGCAACTTCAAGAAGGAGTGCTATAGTAGCGAGCAGAGGGGCTATTCCCAATAGCACCAGTAATCCGAATCCGAAGGGTGGTTTCAAAACTATGGAGAAAAGCAGTGGAAAATATGGCACTTCTGCAAATACGACCGTGAGAAAGGCATTGGCTGATCTTTCCAATGTTCAAGGAGACTCTGCAACAGCTATTAGGCGTAACAGCTCCAAAACAAAGGTTTCAGCAGGTTCAAGCACTAAAGTAGTGAGTGTCTCCTTGAGGAAATCCATCACGGGAAGAGTGCAAAGTAATACTACTAGGCAAAATGGAGTTCAGTTACATGCTCCCAATAAAGATGATCAAAAGAACGAAACAAGTGGAGGCCAATCAGGTGCCACAAAGGATAGGTTTGGAAGGAAGCCTATCTTACCTAAAACTACAAGCACTTCAAGAATGTCTCTACCAGTACCGAAGAGGGTAAACAGGGCAGATATGAGTAACACAAAGGAAAATGCTGGAAGTTCTGAAACAGCTAACGGCCAAAGTGGTCTTCCTGCTAAGGCAACAACAGGCGTAAGAGTCAGTTCCCAACTAAATAATGCAAGAAGCCATCTATGGAAGACTCGAGTGAGTGATGGCTTTGTTCAAATGGTTCAAAGCAATGTTTTACAAGCATCCTCAAGGAAGTCCATCAAGCCTATTGTTAAGACCACAGTAAAGGCTTCCGCAGCTCGAAGGACATTAAAATCTAAATCCATATCATGTCAGAGTAAATCAAAATCAACTGCTGCAGTGTCGTCTAAGGATGAGGAAACAGCTTCTTTGTCTCTTCCTGAGAATGGCTCAGCGAAAGTTTCTGATGATGCAAATCAAAGACATCTTCAATGTGTCGGAGAGGGCAACCTGATAACAAGTTCGTCAGAGTTCCTTCCAAGGAAAAAGTCCACCCGCCGGAAATCTTATACAACTTCATTAATTGAAAGATCTAAGTTTCTCAAGGAAAGTGGTGAAGTTAAGGAGCAGGATAACCTACCAAATATAGATAATGAATGCAATCAACTAGAAGTTTCTGAATACATTGATGACATATATCAGTACTATTGGGTTACAGAGGCATATAGTCCAACTCTGGCAAATTACATGTCAATTCAGACAGACATTACACCTCAGATGCGAGGCATATTGGTCAATTGGCTAATTGAAGTACACTTCAAATATGATTTGATGCCAGAAACTCTGTATCTCACAATTACATTGTTGGATCAATATCTTTCCCAAGTGACTATCAAAAAGATTGATATGCAGTTAGTTGGTCTAACTACACTTCTGCTAGCTTCAAAATATGAGGATTTTTGGCATCCAAGGGTCAAAGATTTACTTAGCATCTCGGGCGAGTCCTATACTAGAGATCAAATGCTTGGAATGGAGAAGCTTGTTCTTAGAAAATTGAACTTCCGTCTTAACTGTCCGACTCCTTACGTTTTTCTAGTAAGGTTTCTTAAGGCTGCGCAGACAGTAGATAAGAAGCTTGAACACATGGCATTCTTTCTCATCGAACTATGCTTAGTAGAATATGAAGCTTTAGCATTCAAGCCTTCATTACTATGTGCATCAGCTCTCTATGTTGCACGTTGTACTCTGCAAATAACCCCACCATGGACACCACTTCTTCGCAAGCATACGCGTTATGAAGCTTCACAGATCAGGGGTTGTGCGGATATGATATTGAGATTTCATAAAGCTGCAGGGGTGGGAAAGTTAACAGTTACATACGAAAAATACTCCAGACAGGAATTCAGTGGGGTTGCAGCAGTGAAACCGTTGGATAGGCTTCCCCTTCCCCTTTGA 1995 0.419 MVSLKGKSRVDSTRVSVGGQSRPSVGGRNFKIYSGTDRIKVGEGLMTSTGEARETGATSRRSAIVASRGAIPNSTSNPNPKGGFKTMEKSSGKYGTSANTTVRKALADLSNVQGDSATAIRRNSSKTKVSAGSSTKVVSVSLRKSITGRVQSNTTRQNGVQLHAPNKDDQKNETSGGQSGATKDRFGRKPILPKTTSTSRMSLPVPKRVNRADMSNTKENAGSSETANGQSGLPAKATTGVRVSSQLNNARSHLWKTRVSDGFVQMVQSNVLQASSRKSIKPIVKTTVKASAARRTLKSKSISCQSKSKSTAAVSSKDEETASLSLPENGSAKVSDDANQRHLQCVGEGNLITSSSEFLPRKKSTRRKSYTTSLIERSKFLKESGEVKEQDNLPNIDNECNQLEVSEYIDDIYQYYWVTEAYSPTLANYMSIQTDITPQMRGILVNWLIEVHFKYDLMPETLYLTITLLDQYLSQVTIKKIDMQLVGLTTLLLASKYEDFWHPRVKDLLSISGESYTRDQMLGMEKLVLRKLNFRLNCPTPYVFLVRFLKAAQTVDKKLEHMAFFLIELCLVEYEALAFKPSLLCASALYVARCTLQITPPWTPLLRKHTRYEASQIRGCADMILRFHKAAGVGKLTVTYEKYSRQEFSGVAAVKPLDRLPLPL* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2645 664 MobiDBLite consensus disorder prediction 51 96 - -
Lja3g2645 664 PANTHER CYCLIN-B3-1-RELATED 141 659 - -
Lja3g2645 664 SUPERFAMILY Cyclin-like 539 659 IPR036915 -
Lja3g2645 664 MobiDBLite consensus disorder prediction 1 30 - -
Lja3g2645 664 MobiDBLite consensus disorder prediction 9 23 - -
Lja3g2645 664 SMART cyclin_7 446 530 IPR013763 -
Lja3g2645 664 SMART cyclin_7 543 626 IPR013763 -
Lja3g2645 664 PANTHER CYCLINS 141 659 IPR039361 -
Lja3g2645 664 Gene3D - 532 661 - -
Lja3g2645 664 Gene3D - 426 531 - -
Lja3g2645 664 SUPERFAMILY Cyclin-like 401 537 IPR036915 -
Lja3g2645 664 SMART Cyclin_C_2 539 657 IPR004367 -
Lja3g2645 664 MobiDBLite consensus disorder prediction 215 234 - -
Lja3g2645 664 MobiDBLite consensus disorder prediction 117 181 - -
Lja3g2645 664 Pfam Cyclin, C-terminal domain 539 655 IPR004367 -
Lja3g2645 664 MobiDBLite consensus disorder prediction 295 338 - -
Lja3g2645 664 CDD CYCLIN 440 529 IPR013763 -
Lja3g2645 664 Pfam Cyclin, N-terminal domain 411 537 IPR006671 -
Lja3g2645 664 CDD CYCLIN 539 625 IPR013763 -
Lja3g2645 664 MobiDBLite consensus disorder prediction 117 234 - -
Lja3g2645 664 MobiDBLite consensus disorder prediction 50 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2645 Lja-Chr3 36427081 36435420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2645 25 662 Core Cell Cycle Gene Families AT1G16330 46.119 1.38e-170 500