Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2642 ATGGCAGATCATGAGCTGATTTTGTTGGATGAATGGCTTAGTATGTTTGGTATGAGAGCTAGGATAGCACTAGCTGAAAAAGAGATCAAGTATGAGTACAAGGAAGAGGATCTAACGAACAAGAGCCAATTGCTTCTGGAAATGAACCCAATTCACAAGAAGATCCCTGTTCTCATCCATCACGGTAAACCCATTTGTGAGTCCATCATTATTGTGGAGTACATTGATGAGGTTTGGAAGGAGAAAGCTCCACTGCTACCCTCAGAACCTTATCAGCGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTAACAAAAAGGTTGGTGATGTTGGGGGGAGGATATGGGCTGGAAAGAGAGATGGGATTGAAGAGGCAAAGAAGGAGTTAATAGAGGGCTTAAAGGAATTGGAGAAGGTTCTAGGAGTCAAGCCTTATTTTGGTGGTGACACATTTGGGTTTGTTGACATTGCTCTCATCCCTTTCTATACCTGGTTCTATACTTATGAGGCACTATGCAAGTTCAAAGTGGAGGCAGAGTGTCCTAAGCTCATTGCTTGGGCAAAGAGATGCAAGCAAAGGGAGAGTGTTTCCAAATCTGTTGCTGATGAGAAGGAGGTCTATGATTTTGTTGTTAACTACAGGAAGAGTTTTGAGTTGGACCTGTGA 666 0.4324 MADHELILLDEWLSMFGMRARIALAEKEIKYEYKEEDLTNKSQLLLEMNPIHKKIPVLIHHGKPICESIIIVEYIDEVWKEKAPLLPSEPYQRAQARFWADFVNKKVGDVGGRIWAGKRDGIEEAKKELIEGLKELEKVLGVKPYFGGDTFGFVDIALIPFYTWFYTYEALCKFKVEAECPKLIAWAKRCKQRESVSKSVADEKEVYDFVVNYRKSFELDL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2642 221 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Lja3g2642 221 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Lja3g2642 221 Gene3D Glutaredoxin 1 88 - -
Lja3g2642 221 Pfam Glutathione S-transferase, C-terminal domain 121 189 - -
Lja3g2642 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 213 - -
Lja3g2642 221 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Lja3g2642 221 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Lja3g2642 221 CDD GST_C_Tau 90 210 IPR045074 GO:0004364|GO:0006749
Lja3g2642 221 Coils Coil 119 139 - -
Lja3g2642 221 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Lja3g2642 221 CDD GST_N_Tau 6 79 - -
Lja3g2642 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lja3g2642 221 Gene3D - 89 220 - -
Lja3g2642 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 213 IPR045073 -
Lja3g2642 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2642 Lja-Chr3 36408274 36409538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2642 4 217 Glutathione S-transferase Gene Family AT1G78380 64.019 8.21e-98 282