Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2634 ATGGAATCGCCATTTAAGGGTAACATATTGAAGGGGAAGGTTGCTCTCATCACTGGTGGAGCTTCTGGAATCGGCTTCGAAATCTCCACCCAATTCGGCAAACATGGCGCCTCCGTTGCGCTCATGGGTCGCCGGAAGCAAGTCCTCGATTCTGCTGTCTCCGTTCTGCAATCGCTTTCGATTCCGGCGATTGGTTTTGTGGGTGATGTGCGGAAACAAGAGGATGCGGCGAGGGTTGTGGAATCCACTTTCAAGCATTTTGGGAAGATCGACATTCTTGTCAACGCTGCTGCTGGGAATTTTCTAGTTTCTGCGGAGGATCTCTCACCAAATGGATTCAGAACAGTTCTCGATATTGATTCTGTTGGGACATTTACAATGTGCTCTGAAGCACTAAAGTATCTCAAGAAAGGAGGACTAGGAAGGGGCTCTTCTGGTGCGGGAGCAATAATAAACATTAGTGCTACCTTGCATTATACAGCTTCTTGGTATCAAATTCACGTGTCTGCAGCGAAGGCTGCTGTTGATGCCACTACAAGAAACTTGGCACTAGAATGGGGAACAGACTATGATATTAGAGTCAATGGGATCGCACCGGGTCCCATAAGTGGCACTCCTGGCATGAGTAAACTAGCTCCTGATGAAATAAATAACAAATCCAAAGATTACATGCCTCTTTATAAAGAAGGGGAGAAGTGGGATATTGCCATGGCTGCTCTCTTCCTGGTATCAGATGCAGGAAAATACATTAATGGCGACACTCTCATAGTGGATGGAGGACTTTGGCTGAGCCGGCCTCGACATTTACCAAAAGAGGCAGTGAAGCAGGCATCGCGAGCAATAGAAAAGAGATCCAGAAATCAACCAATTGGTGTTCCAAAAAGCAAGCTATGA 894 0.4664 MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLSIPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDIDSVGTFTMCSEALKYLKKGGLGRGSSGAGAIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKEGEKWDIAMAALFLVSDAGKYINGDTLIVDGGLWLSRPRHLPKEAVKQASRAIEKRSRNQPIGVPKSKL* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2634 297 MobiDBLite consensus disorder prediction 275 297 - -
Lja3g2634 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Lja3g2634 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Lja3g2634 297 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Lja3g2634 297 CDD TER_DECR_SDR_a 10 263 - -
Lja3g2634 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 263 IPR036291 -
Lja3g2634 297 Gene3D - 2 267 - -
Lja3g2634 297 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 1 290 IPR045017 GO:0008670|GO:0009062
Lja3g2634 297 PANTHER BNAA05G26380D PROTEIN 1 290 - -
Lja3g2634 297 Pfam Enoyl-(Acyl carrier protein) reductase 19 261 - -
Lja3g2634 297 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Lja3g2634 297 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Lja3g2634 297 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Lja3g2634 297 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Lja3g2634 297 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
Lja3g2634 297 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2634 Lja-Chr3 36161491 36165646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2634 1 297 Acyl Lipid Metabolism Gene Families AT3G12800 80.201 1.11e-166 462