Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2631 ATGATGGAACAATCAAGATTCCCCAAACAACTTCAGTGCTATATCATGGAGCCTAGAACGCAGGAATTCCAGCCTGGATCTCAGCCAGTAATGCCGGATCGTCTGGATGTCATGCATACTAATGGAAGACCATTTGACTATTACACATCAGATGTTAAGCCAGTTCGTAATTATTCAATACAGACGGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGGGTGAATCTCAAGAAGCCTGTATTTTCAAATGTCAGTGATTCTAATTATACAACTAGTTATAGAGGAGTTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGGTCAGGCATTTCTATGTTCTCAACGGTTGAGAAAGGTCCAACAGAGTTTAACAGACAGAGTACATCATTACATGGAGACAGAAGCTATTACAGGTCAATTCGATCAATACCAAGAACTTCATTGAATCAGGAGACTAGTCAATTTGTGCATGGATATGGCTCTTCTGGTGGTTCTGATAGCTCATCAATGATGATGAAGTGTCTTTGCAGCTTTGGTGGTAAAATATTACCACGGCCTAGTGATGGAAAGCTAAGATATGTTGGAGGCCAGACACGCATTCTTCGTCTAAGAAAGGACATATCGTGGCAGGAGCTTAGGCAGAAAGCAATGTTAATCTATAATTTGGTTCATGTACTGAAGTATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTATCATGTGATGAGGATTTGCAGAATATGATGGAGGAGTATAATATTCTAGAAGATAAAGAACACCCACAAAAGCTTAGGATGTTTTTGTTCTCAATGAATGATTTGGAAGATGCTCAGTTTGCTCTAAGCAGCATTGGTGGTGATTCTGAGATCCAGTATTTTGTTGCTGTTAATGGCATGGACTTAGGATCTAGAAACAACTCAACACCACTTGGTGTCAGCTTTGCAGCAGCTGATATAAATGAATTGGACAGGCAAACTATGGAGAGGGAGACCAGTAGAGTTGCTGTAGAATCAATAGGTGTCAGCAGTATTCCCTTGACCAAAAAATCTGAATCTTCATTGGTTATTCAATCTTCACAGCCAGTATTACCAACTTCTTCAAATGCGTATGAAACTGGGCAGCTGAGTTATAGTGATCAAATTATGCAATCTGGGGAAATTAGTAATCAATATCTTCTTCACCATGGCCTTAATCCGGCTCCTAACCCTGTGGTTGAGGACACTCCAATTTCTATGGCTCCTCAAATGCTGAATTACCAACAATGGGTTCTGAATGAAGATCATCCACCCAGTGGAGTACAAATGTCGGTGGAAAATATAGGTGATGGCTCAGTTAAACAAGGGAGTGACCCTGTTAATGTCGTATCCTTGGAAACCCCACCCCTAGCTCCCTCACAGCCCTTGGATGGTTATTTGAAAAATAATTGTCCTGAAGCATCAGCTATAGTTACCTTGCCTGAGGGGCATCTAACCTCCTTGCCTTCCACTATAAAGGTTCAACACCAGGATTATGAAGAGGCCTCTACTACATCTAGCAGTGCATTTGTTCCTGCTTATGTTGATTCTCAGTCAAATGCAATTGATTTGAATTGTCTTCATCCTCCCCCACTTCCTAAAAGAGTTTACTATTCAGAAAGAATTCCAAGGGAGCAAGTAGAGGTCCTGAATCGGTCCTCAAAGTCAGATGACACGCTGAACTCTCAGTTTCATGAGTCAGACTTACTTTGTGATGTCAAGCCAGAGGGTTCAGTGGCAGAATCTAGTGACAACTTGAGTGATTATAATCTGTTAAATCCAACTGAGAAATTGAGCATTGCAGCAAAGCCCTTACTTTGTGATGTCAACCCAGAGGGTTCAGTGACAGAATCTAGGGACAACTTGAGTGATTATAATCTGTTAAATCCAACTGAGAAATTGAGCATTGCAGCAAAGCCCTTACTAGCAGATGACCATACCATTGACAATGGGTTTGCCAAACATCAAATGAATAAACCATTGCCTGACACGAACAGTCAGATTAAGCCAAACCTATCCGAGCACATGGATCCTGAGTTCAAGCAGGTGTTACTGAACAATGAAAGAAGTAAAGATGTGGAAGCTGAAAATTATTGTAATGATGAAACCAAAACCAAAACCAATACCAAATCAGACCTTCCTGCTATTCAACATGTTTCCTCTGTAGAACACCTTGATGATCCAGCATCCAATCTTCCGGAGATTGATTGGGGTGAGGTCTCTGGGAAGGAATCTAATGATAATCATATGGTGCAAGCACTTCCTGTTTCTTTAACTGGGGACATAACCAAAGATGTTTCTCAAGATTTTCCCCCAAATGTTGTTTCAAAACAAGCACAAGGTGTCCTTATTGATATCGATGATCGATTTCCCCGTGAATTGCTTTCTGATATGTTTTCTAAAGCAATACTTGCAGAAGATCCCTCCACTCTACATCCACTAACCACAGGTGGAATAGGCTTAAGCGTAAATATGGAAAATCATGAACCTAAACGGTGGTCATATTTTCAAAAGTTGGCACAAGGGCTTGATAATGTCTCTCTTATTGATCAGGATCATGTTGGTTTTTCACCTGTGATAGGAAAAGCTGACGAAGCTTTTCTTGTTCATGAGGATTCCCACCTCAATTTTGGTCAAGAAAGTCAGAAGGACTTACTTAGAAGGAGTGGAACAGAAACTGCTGTTCTGAATTCCAATTATGATCTATCCCAACTTACTGACGCTGAAAGCATGCAGTTCGATGCTATGATGGAAAACCTGAGAGCACAAGAATCAGAGTATGAGGATGGCAAGTTTGAAACAAAAAATTGCAATCTACCTCCACTTGATCCTTCTTTAGGAGATTTTGATATCAGTACCGTGCAGGTCATTAAGAACGAAGATCTTGAAGAGCTGAAGGAATTAGGTTCTGGTACCTTTGGGACCGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTGGAATTCTGGCGGGAAGCGGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGGATGGGCCGGGAGGAACAATGGCCACTGTTACTGAATTCATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGACAGGTATCTTGATCGTCGCAAGCGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTCGTCAACTTGAAAGATCCTTTACGGCCAATTTGCAAGGTTGGTGATTTCGGCTTGTCAAAAATTAAAAGGAATACCCTAGTTACTGGTGGTGTGCGGGGGACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGAACCAGCAACAAAGTCTCAGAGAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTAACCGGTGAGGAGCCATACGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAATATATTAAGGCCAACAATTCCGAGTGAGTGTGATCTTGAATGGAGGACACTGATGGAGGAATGTTGGGCACCCAATCCTATAGCCAGGCCTTCCTTCACAGAAATAGCAAGTCGCTTGCGCATAATGTCTGCAGCAGCTTCTAGCCAAACAAAAACACAGGGCCATAAGGCACCTAAATGA 3762 0.4152 MMEQSRFPKQLQCYIMEPRTQEFQPGSQPVMPDRLDVMHTNGRPFDYYTSDVKPVRNYSIQTGEEFALEFMRDRVNLKKPVFSNVSDSNYTTSYRGVLGISHAGSESGSGISMFSTVEKGPTEFNRQSTSLHGDRSYYRSIRSIPRTSLNQETSQFVHGYGSSGGSDSSSMMMKCLCSFGGKILPRPSDGKLRYVGGQTRILRLRKDISWQELRQKAMLIYNLVHVLKYQLPGEDLDALVSVSCDEDLQNMMEEYNILEDKEHPQKLRMFLFSMNDLEDAQFALSSIGGDSEIQYFVAVNGMDLGSRNNSTPLGVSFAAADINELDRQTMERETSRVAVESIGVSSIPLTKKSESSLVIQSSQPVLPTSSNAYETGQLSYSDQIMQSGEISNQYLLHHGLNPAPNPVVEDTPISMAPQMLNYQQWVLNEDHPPSGVQMSVENIGDGSVKQGSDPVNVVSLETPPLAPSQPLDGYLKNNCPEASAIVTLPEGHLTSLPSTIKVQHQDYEEASTTSSSAFVPAYVDSQSNAIDLNCLHPPPLPKRVYYSERIPREQVEVLNRSSKSDDTLNSQFHESDLLCDVKPEGSVAESSDNLSDYNLLNPTEKLSIAAKPLLCDVNPEGSVTESRDNLSDYNLLNPTEKLSIAAKPLLADDHTIDNGFAKHQMNKPLPDTNSQIKPNLSEHMDPEFKQVLLNNERSKDVEAENYCNDETKTKTNTKSDLPAIQHVSSVEHLDDPASNLPEIDWGEVSGKESNDNHMVQALPVSLTGDITKDVSQDFPPNVVSKQAQGVLIDIDDRFPRELLSDMFSKAILAEDPSTLHPLTTGGIGLSVNMENHEPKRWSYFQKLAQGLDNVSLIDQDHVGFSPVIGKADEAFLVHEDSHLNFGQESQKDLLRRSGTETAVLNSNYDLSQLTDAESMQFDAMMENLRAQESEYEDGKFETKNCNLPPLDPSLGDFDISTVQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGTSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNILRPTIPSECDLEWRTLMEECWAPNPIARPSFTEIASRLRIMSAAASSQTKTQGHKAPK* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2631 1253 Pfam Protein tyrosine and serine/threonine kinase 971 1233 IPR001245 GO:0004672|GO:0006468
Lja3g2631 1253 Gene3D Phosphorylase Kinase; domain 1 963 1057 - -
Lja3g2631 1253 CDD PB1_UP2 176 272 - -
Lja3g2631 1253 SMART PB1_new 187 274 IPR000270 GO:0005515
Lja3g2631 1253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1095 1107 IPR008271 GO:0004672|GO:0006468
Lja3g2631 1253 ProSitePatterns Protein kinases ATP-binding region signature. 976 1001 IPR017441 GO:0005524
Lja3g2631 1253 SUPERFAMILY CAD & PB1 domains 188 277 - -
Lja3g2631 1253 SMART serkin_6 970 1236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2631 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 622 1253 - -
Lja3g2631 1253 PANTHER SERINE-THREONINE PROTEIN KINASE 92 617 - -
Lja3g2631 1253 ProSiteProfiles Protein kinase domain profile. 970 1235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2631 1253 Gene3D - 191 274 - -
Lja3g2631 1253 CDD STKc_MAP3K-like 976 1233 - -
Lja3g2631 1253 PRINTS Tyrosine kinase catalytic domain signature 1160 1182 IPR001245 GO:0004672|GO:0006468
Lja3g2631 1253 PRINTS Tyrosine kinase catalytic domain signature 1052 1065 IPR001245 GO:0004672|GO:0006468
Lja3g2631 1253 PRINTS Tyrosine kinase catalytic domain signature 1089 1107 IPR001245 GO:0004672|GO:0006468
Lja3g2631 1253 PRINTS Tyrosine kinase catalytic domain signature 1204 1226 IPR001245 GO:0004672|GO:0006468
Lja3g2631 1253 Pfam PB1 domain 189 272 IPR000270 GO:0005515
Lja3g2631 1253 Gene3D Transferase(Phosphotransferase) domain 1 1058 1252 - -
Lja3g2631 1253 PANTHER - 622 1253 - -
Lja3g2631 1253 PANTHER - 92 617 - -
Lja3g2631 1253 SUPERFAMILY Protein kinase-like (PK-like) 960 1233 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2631 Lja-Chr3 36111975 36121264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2631 2 572 MAP Kinase Kinase Kinase AT1G16270 38.222 3.32e-83 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lja3g2631 PK_Tyr_Ser-Thr 8.2e-61 CL0016