Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2624 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGAGTCACTGCTAGCAGCATTGGGGTGCTCCTTCAGGCTTGTGGCTTTCGAGTTACTTCTATCAAAATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGAGAGGTGTTTGTCTTGGATGATGGGGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGATTCTTGGACACCAAATTAACTCGCGACAATAACATCACTACAGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGGAGAGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACGTTACTGATGCCATCCAAGAGTGGATAGAGCGTGTAGCACATATTCCAGTTGATGGAAAAGAAGGCCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATCGAATCTATGCCTTTTATTGAAGCACTAGGCCAATTTTCCTACCGCGTAGGCTCTAGCAATTTCTGTTTGGTTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAACCAACTCAGCATAGTGTCCGCCAACTTAGAGGCTTAGGGATGATCCCAAATCTTCTTGCCTGTCGTAGTTCAAAGGAGCTTGATGACAATGTCAAGGCCAAGCTTGCTCAGTTTTGTCACATGCCGTCATTAAACATACTTACTCTCTATGATGTTCCAAATATTTGGCACATTCCTTTACTATTAAGAGACCAGAAGGCACACGAGGCTATCCTGAAAACATTAAACTTGCAAGGTGTTGCTACAGAGCCTAATTTTAAGGAGTGGATCACCAGAACAAAAGTTTATGACAAATTTGATGGATCTGTTAGAATTGCTATGGTGGGAAAATATACAAGCCTTTCAGATGCTTACCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTATCACTCACAATCGTAAGCTTATTTTGGACTGGGTCCCTGCTGGGGATCTTGAAGATGCTACTTCTAAAGAGGATCCTGATGCATACAAAGCTGCTTGGGATCTTTTGAAGGGTGCTAATGGGATTCTTGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAAAACAGCGTTCCGTTTCTGGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTGCCAGATCTGTTCTTGGTCTTCATGATGCTAATAGCACAGAATTTGATCCGGAAGCCAAAAATCCTTGCGTCATATTTATGCCAGAAGTTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACATACTTCCAAGTTGCTGATTGCAAATCAGCTAAGTTGTATGGTAATGCAAGCTTTATTGATGAGAGACATCGGCATAGATACGAGGTTAATCCTGACATGATACCACAACTTGAGAAAGCTGGTCTGTCCTTTGTTGGAAAAGATGAAACTGGGAGGCGCATGGAGATAATTGAATTGCCTGGTCATCCTTTCTTCATTGGTGCTCAATTTCACCCTGAGTTCAAGTCAAGACCTGGAAAACCTTCTCCACTATTCTCAGGATTAATAGCAGCAGCATGTGAGAGGACAGTTCTGCCGGTAAGCAACGGACATGCCAAGTTAACACCCAATGGCGTTTTAAATGGACACTCTCCTACGCAGAAAGAACATAATGGAAATGGGTTCAAATCTTCCAATGGTTCCTCAAATGGAGTATATGCCAATGGCAATGGAAGCTGCTAA 1803 0.4315 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDTKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHVTDAIQEWIERVAHIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGSSNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGMIPNLLACRSSKELDDNVKAKLAQFCHMPSLNILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLQGVATEPNFKEWITRTKVYDKFDGSVRIAMVGKYTSLSDAYLSVLKALLHASITHNRKLILDWVPAGDLEDATSKEDPDAYKAAWDLLKGANGILVPGGFGDRGVQGKILAAKYARENSVPFLGICLGMQIAVIEFARSVLGLHDANSTEFDPEAKNPCVIFMPEVSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNASFIDERHRHRYEVNPDMIPQLEKAGLSFVGKDETGRRMEIIELPGHPFFIGAQFHPEFKSRPGKPSPLFSGLIAAACERTVLPVSNGHAKLTPNGVLNGHSPTQKEHNGNGFKSSNGSSNGVYANGNGSC* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2624 600 PANTHER CTP SYNTHASE 1 572 IPR004468 GO:0003883|GO:0006221
Lja3g2624 600 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Lja3g2624 600 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Lja3g2624 600 Gene3D - 295 556 IPR029062 -
Lja3g2624 600 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Lja3g2624 600 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Lja3g2624 600 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Lja3g2624 600 MobiDBLite consensus disorder prediction 566 600 - -
Lja3g2624 600 PANTHER CTP SYNTHASE 1 572 - -
Lja3g2624 600 MobiDBLite consensus disorder prediction 563 600 - -
Lja3g2624 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Lja3g2624 600 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Lja3g2624 600 Gene3D - 1 292 IPR027417 -
Lja3g2624 600 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Lja3g2624 600 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Lja3g2624 600 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2624 Lja-Chr3 36005298 36012341 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4059 3 79921027 79934038 Lja3g2624 3 36005298 36012341 PCT