Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2611 ATGCTGATATTAGTTATCACACTAGCTTCAGCTGCTTTGTTAGTACTTGTTGGACTCTATGCCTTCTTTTACCGCAAGAGGGTATCAGAAAATGAGAACAAGGACATTGAAAGCTCAGAGCACAAGCAGGAAGAGATAGCTCAGAAGGAGGACTTGGTGATCTTTCAAGGAGGAGAGGACTTGACAATTTGTGACATTTTGGATGCTCCTGGGGAAGTGATTGGAAAATCCAATTATGGGACTCTGTATAAGGCTCTGTTGCAGAGGAGCAACAGAGTGAGGCTGCTGAGGTTTCTGAGACCAGTGTGCACCACAAGAGCTGAAGAGCTGGATGAGATGGTTCAGTTTCTTGGAAGGATTAGGCATCCTAATTTGGTTCCACTTCTGGGATTTTACACTGGGCCAAGGGGAGAGAAGCTTCTTGTTCATCCCTTCTATAGGCATGGGAATTTGACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATACATAGAATATCCATTGGCATAGCTAAAGGATTAGAGCATCTTCACACAGCACAAGAGAAGCCAATTATCCATGGAAACCTCAAGTCGAAAAACATTCTTTTGGACCGCTCGTACCAACCGCACATCTCAGATTCCGGCATCCATCTTCTGCTGAACCCCACTGCTGGCCAAGAATTGCTTGAAAGTTCAGCTGCTCAGGGTTACAAGGCACCTGAGCTCATCAAAATGAAGGATGTCAGTGAAGAGAGTGATATATATAGCCTCGGCGTAATTTTGCTGGAATTGCTTTCCGGAAAGGAGCCTATCAATGAGCACCCAACTCCTGATGAGGATTTCTACTTACCAAATTTCATGAGGAATGCTGTTCTTGGACATAGAATTGCTGATTTGTACCATCCAGCCATTCTTGTCAGCAACACTAGAGGTGATGAAATTCCAGTTACAGAAGAATGCATTCTCAAATTTTTCCAACTTGCTATGGCCTGTTGCTCCCCTTCTCCTTCAATTAGACCTAACATAAAGCAAGTCCTAAGGAAGCTTGAAGAAATTATACAATAG 1062 0.4322 MLILVITLASAALLVLVGLYAFFYRKRVSENENKDIESSEHKQEEIAQKEDLVIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNRVRLLRFLRPVCTTRAEELDEMVQFLGRIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGECYKWSNIHRISIGIAKGLEHLHTAQEKPIIHGNLKSKNILLDRSYQPHISDSGIHLLLNPTAGQELLESSAAQGYKAPELIKMKDVSEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILVSNTRGDEIPVTEECILKFFQLAMACCSPSPSIRPNIKQVLRKLEEIIQ* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2611 353 Pfam Protein tyrosine and serine/threonine kinase 72 348 IPR001245 GO:0004672|GO:0006468
Lja3g2611 353 Gene3D Transferase(Phosphotransferase) domain 1 147 353 - -
Lja3g2611 353 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 351 - -
Lja3g2611 353 ProSiteProfiles Protein kinase domain profile. 68 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2611 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 3 351 - -
Lja3g2611 353 SUPERFAMILY Protein kinase-like (PK-like) 71 350 IPR011009 -
Lja3g2611 353 Gene3D Phosphorylase Kinase; domain 1 28 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2611 Lja-Chr3 35729159 35731791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2611 2 351 Carbohydrate Esterase AT5G61570 57.341 4.23e-140 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja3g2611 PK_Tyr_Ser-Thr 9.1e-33 CL0016