Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g2601 | ATGGTACTTGCTGGTAAGCTTAGTACTGAAATTGGGATCAAAGCCCCTGCTGCCAAGTTCTACGACCTCTTCGCAAAGCAGCTTCACGATGTTCAAAACCACTGCGAGAGAGTGCATCACACCAAACTTCATGAGGGCGAGGACTGGCATGAAGTTGGTTCCGCGCTTAAACACTGGACTTATGTTATAGATGGCGAGGTACACACATGTCAGGAGCGCATTGAATCCGTTGATGAAGAGAACAAAACAATCAAATACAGCCTCTTCGATGGAGATATCGGTCAGCACTACAAGACCTTTCTGCTAACCCTTCAAGTGATTGAGAACAAAGATGGCCATGATACTGTTAAATGGACTGTTGAATATGAGATGCACCATGAGGAGAAAGAACCACCACATGGTTGGATGGAGTACGTGCATAAATGCACTAGAGATATTGATGCCAATCTTCTCAAGGCATAG | 462 | 0.4502 | MVLAGKLSTEIGIKAPAAKFYDLFAKQLHDVQNHCERVHHTKLHEGEDWHEVGSALKHWTYVIDGEVHTCQERIESVDEENKTIKYSLFDGDIGQHYKTFLLTLQVIENKDGHDTVKWTVEYEMHHEEKEPPHGWMEYVHKCTRDIDANLLKA* | 154 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g2601 | 153 | Pfam | Pathogenesis-related protein Bet v 1 family | 3 | 152 | IPR000916 | GO:0006952 | |
| Lja3g2601 | 153 | CDD | Bet_v1-like | 5 | 132 | - | - | |
| Lja3g2601 | 153 | SMART | Bet_v_1_2 | 2 | 153 | IPR000916 | GO:0006952 | |
| Lja3g2601 | 153 | PANTHER | MLP-LIKE PROTEIN 423 | 1 | 151 | - | - | |
| Lja3g2601 | 153 | PANTHER | PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN | 1 | 151 | - | - | |
| Lja3g2601 | 153 | Gene3D | - | 1 | 153 | IPR023393 | - | |
| Lja3g2601 | 153 | SUPERFAMILY | Bet v1-like | 1 | 152 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja3g2601 | Lja-Chr3 | 35474619 | 35477037 | Tandem |