Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2596 ATGGATATGGAGTGGTCTGAATCGCGGTACGAGGGTAGGAATGGTAAAGACGAATCATCCCCTGTGAGGGAGCCATATGATGATGATGGGGTGGAGAAATCAAGTAAGCATAGAGCCAAGGATAGGAAGAAGAGCGACCGGAGTAAAGACCGGGAACCGACCAAAGAGGCGAGGGATGTAGAGAAGGATAGAGTGGGTGGAAGGGAACGGAAGAAGGAGGATAGGGATGAACGTGATAAGGACAGAGGGAAAGATGGGAAGATGAGGGAGAAAGATTATGATAGAGAGAAATACCGGGAGAAAGAGCGCGAGAGGGATCGAGATAAGAAGGACCGGAGCAATCGTGAGAAGGAAAGGGAGATAGAAAAAGATGGGGAGAGAGGGCGGGATAAAGAAAGGGAAAAGGAGAAGACTAGGGATAGGGATAAGGGGAAGGAGAGGGAGCGAGAGAAGCATAGAGATAGAGAAAAGGAGAGGGAAAGCTATAGAGATGGGGACAGGGAGAAGGACAAGGGGAAAGATAAAATTAGAGAGAAGGAGAGGGAGATGGATCGAGATAAAGAAAGGTCGAGAGATAGAGTGAGCAGAAAGACGACTCACGAGGAAGATCATGACTTGAGTAATGTTGATGATAAAGTAGACTACCGTGAAAAGAGAGATGAGGACGTTGGCAAGCAAGCGAAGGCTTCAAAGCTGGGTAAAGATGATCATGATGGCGAAACATCAGCGCACTTGTCATCAGCTGAACTTGAAGAACGTATCTTGAAGATGAAAGAAACAAGGGCAAAGAAACATTCTGAAGCTGCTTCCGAAATCTCATCATGGGTTAGTAAAAGCCGTAAGATTCAAAAGGAAAGAGCATTGCAGCTCTCAAAGGTTTTTGAGGAGCAGGACAACATTGCAGTAGAGGGAAGTGATGATGAGGATACAACCAATCACACTGATAACCACCTGGCGGGTGTGAAAGTTCTTCATGGCCTTGATAAAGTTGTGGAAGGGGGGACAGTAGTTCTGACTATCAAAGATCAGCCCATACTTGCTGATGGTGATATTAATGAAGATGTCGATATGCTTGAGAACGTGGAAATTGGAGAACAAAAACGACGGGATGAGGCTTATAAAGCTTCAAAAAAGAAACCTGGCATATACGAGGATAAGTTCAATGATGACCCCTCTGTGGAGAAGAAAATGCTTCCACAATATGATGATCCAACTGCGGATGAGGGTTTAACTTTGGATGAAAGAGGACGATTCACTGGTGAAGCTGAGAAGAAACTTGAAGAGCTGAGAAGAAGATTAACAGGTGATTCCTCCACGAATAACCTTGAAGATCTAACTTCATCTGGAAAGGTATCATCAGATTACTATACTCAAGAAGAAATGCTAAAATTTAAGAAGCCCAAGAAGAAAAAGTCCTTGCGGAAGAAAGATAAGCTGGACATTAATGCCCTCGAAGCTGAAGCTATCTCTTCAGGATTGGGTGTTGGTGACCTTGGTTCTCGGAAAGATGCTAGTAGGCAAGCCATAAAAGATGAACAAGAAAGATTGGATGCTGAGATGAGAAATAATGCGTACCAGTCTGCTTATGCCAAAGCTGACGAGGCCTCCAAATTACTGCTTCTAGAACAAACTATCAATGTTAAAGCAGAGGAAGATGAAACTCCAGTTTTTGCAGATGATGATGAGGATCTTCGTAAATCCTTAGAGAAAGCAAGGAGATTAGCTCTGAAAAAGCAGGAGAAAGAAGTGGCATCTGGCCCTCAAGCTGTTGCTTTACTTGCCACCTCAAACCACAATAATGAGGTTGTGGATGATCAAGCTGGAGCAGATTCACGAGAAAACAAGGTGGTCTTCACAGAGATGGAAGAATTTGTCTGGGGTCTCCACATTGATGAAGAAGCACGTAAGCCAGAAGGTGAAGATGTTTTCATGCATGATGATGAAGTGGCAGAAGTTCGTGATGAACAAAAGAGTGACGAGGCTGGTGGATGGACAGAAGTTAAAGAAGCTAGTGAAGATGAACAAACCAAGTCGGAAGATAAGGAGGAGATAGTTCCAGATGAAACTATCCATGAAGTTTCTGTAGGAAAAGGATTGTCAGGTGCATTGAAACTTCTAAAAGATCGAGGAAGCCTTAAAGAAAGCATTGAATGGGGTGGGAGGAACATGGATAAGAAGAAAAGCAAATTGGTTGGTATCGTAGATGATGAAGGCAAGGATGCACAGAATAAAAAGGAGATTCGCATTGAGAGGACAGATGAGTTTGGTAGAATTTTGACTCCTAAGGAAGCCTTTCGGTTGATTTCACACAAGTTCCATGGTAAAGGACCTGGCAAAATGAAGCAGGAAAAGCGTATGAAGCAATATCATGAAGAATTGAGGATGAAGCAGATGAAGAGTTCAGATACACCATCACTGTCTGTGGAGAGAATGAGGGAAGCTCAAGTTCGTTCGAAGACACCCTATATTGTTCTTAGTGGTAATGTCAAACCAGGACAAACTAGTGACCCAAAAAGTGGTTTTGCTACTGTTGAGAAGGATCTTCCTGGAGGCTTGACACCCATGCTTGGTGATCGAAAGGTTGAGCACTTTCTGGGAATTAAGAGGAAAGCTGAACCATCGAGCGCTAATACCCCAAAAAAGGCTAAATCTTGA 2655 0.4365 MDMEWSESRYEGRNGKDESSPVREPYDDDGVEKSSKHRAKDRKKSDRSKDREPTKEARDVEKDRVGGRERKKEDRDERDKDRGKDGKMREKDYDREKYREKERERDRDKKDRSNREKEREIEKDGERGRDKEREKEKTRDRDKGKEREREKHRDREKERESYRDGDREKDKGKDKIREKEREMDRDKERSRDRVSRKTTHEEDHDLSNVDDKVDYREKRDEDVGKQAKASKLGKDDHDGETSAHLSSAELEERILKMKETRAKKHSEAASEISSWVSKSRKIQKERALQLSKVFEEQDNIAVEGSDDEDTTNHTDNHLAGVKVLHGLDKVVEGGTVVLTIKDQPILADGDINEDVDMLENVEIGEQKRRDEAYKASKKKPGIYEDKFNDDPSVEKKMLPQYDDPTADEGLTLDERGRFTGEAEKKLEELRRRLTGDSSTNNLEDLTSSGKVSSDYYTQEEMLKFKKPKKKKSLRKKDKLDINALEAEAISSGLGVGDLGSRKDASRQAIKDEQERLDAEMRNNAYQSAYAKADEASKLLLLEQTINVKAEEDETPVFADDDEDLRKSLEKARRLALKKQEKEVASGPQAVALLATSNHNNEVVDDQAGADSRENKVVFTEMEEFVWGLHIDEEARKPEGEDVFMHDDEVAEVRDEQKSDEAGGWTEVKEASEDEQTKSEDKEEIVPDETIHEVSVGKGLSGALKLLKDRGSLKESIEWGGRNMDKKKSKLVGIVDDEGKDAQNKKEIRIERTDEFGRILTPKEAFRLISHKFHGKGPGKMKQEKRMKQYHEELRMKQMKSSDTPSLSVERMREAQVRSKTPYIVLSGNVKPGQTSDPKSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRKAEPSSANTPKKAKS* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2596 884 MobiDBLite consensus disorder prediction 45 250 - -
Lja3g2596 884 MobiDBLite consensus disorder prediction 368 421 - -
Lja3g2596 884 MobiDBLite consensus disorder prediction 794 857 - -
Lja3g2596 884 MobiDBLite consensus disorder prediction 1 36 - -
Lja3g2596 884 MobiDBLite consensus disorder prediction 1 250 - -
Lja3g2596 884 PANTHER U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 1 152 846 - -
Lja3g2596 884 Coils Coil 502 522 - -
Lja3g2596 884 MobiDBLite consensus disorder prediction 651 686 - -
Lja3g2596 884 PANTHER SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES 152 846 IPR005011 GO:0000398
Lja3g2596 884 Coils Coil 169 189 - -
Lja3g2596 884 MobiDBLite consensus disorder prediction 259 278 - -
Lja3g2596 884 Pfam SART-1 family 744 792 IPR005011 GO:0000398
Lja3g2596 884 Pfam SART-1 family 262 727 IPR005011 GO:0000398
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2596 Lja-Chr3 35200655 35211100 Dispersed