Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2589 ATGGCCGGAAACTGCTTACCGGCGGTGAAGCTCACCGGAAGTGGCCGGCCGGTACTATTACCGAACGAGATCGAGTGCTTCTTCCTCTCCGGCGTCGACCTTCTCTGCGAAGACGAACCCAACTCCTGGTTCCCTCACCTCAAATCCGGCCTCCTCATCCTCACCACCCACCGCCTCCTCTGGCTCCCCGAACCCGCCGACGGCGGCACTTCCTCCGCTGTCCACCTCGCCGCGATCTCCCACATCTTCCCTCACAAGAAGTCCCTCAAGTCCGTCTTCGCCTCGCCTAGGGTCCGTTTCCAGGTTTCGCCGTCGCCGGAGGGCGGAGTTGCTGCATCGGGGTCGAGGTCTGTGGTGGCCACTATTGTGGTGAGGGGGAAGGGGGAATTCGACGCGTTTGTGGCTAAGTTTTGGGAGAATTGGCGCGCCAGGGCGTGGGAGGAGGCGGAGAGTGGTCAGAGTTCGGGGGCGAATGTGGCGGCGACGGCGGCAACGTCATCGTCGTCGGGTGGGATTTATGGGAGGGACGGGACGGTGAGGATGGTGGGAGTGTCGGGGATATTGAGGAAGGAGCAGGAAATGTGGGAGAGTACTGATAAGAGCTTGCAGGATGCTTTTCAGGATTTGAATGCTCTCATGAGCAAGGCTAAAGAAATGGTGATGCTAGCAGAGAAAATGAGGCAAAAACTTTTGTCTGGCTCAAATTCTCAAACCAATGCAACTAATGAGGAGGAGATGGGTACAAAGGAAGAGATGCAAGATTGGTTATTGAGCGTTGGTATAATATCCCCTGTTACCAAAGAGTCTGCGGGTGCTATGTATCATCAGCAGTTATCTCGTCAGTTGGCAGATTTTGTTAAAGTTCCACTTGAGAGAGCTGGAGGAATTATCAATCTTATTGATATTTATTGTCTCTTCAATCGTGCTCGTGGCACAGAATTGATCTCACCTGATGATTTGTTGCAAGCATGCTCTTTGTGGGAAAAGTTTGATGTCCCAGTCGTTCTACGGAAGTTTGATAGAGGAGTCATGGTAATACAGACTAAGTCCCACAGTGATGAGGAGGTTTTCGCTAAAATCAAGGTGCTTGTTATGAAGCCTGATGCTCTCCGAGCTGGAATAAGTGCTAGTGACGCTGCAATGACACTGGCAGTTGCCCCAGCAATGGCAAAGGAACATCTCTTGTCTGCTGAGAGCAAGGGTATACTGTGCAGAGATATAAGCCCTGATGGATTTCGCTTTTATATTAATTTGTTCCCTGAAATCGATCGAGATGATATGCATGTAGTGAAAGATCAAGGGATTTATGCCTCATGGGTAAGTGCAAACCATGCTCATGGTTAG 1344 0.5126 MAGNCLPAVKLTGSGRPVLLPNEIECFFLSGVDLLCEDEPNSWFPHLKSGLLILTTHRLLWLPEPADGGTSSAVHLAAISHIFPHKKSLKSVFASPRVRFQVSPSPEGGVAASGSRSVVATIVVRGKGEFDAFVAKFWENWRARAWEEAESGQSSGANVAATAATSSSSGGIYGRDGTVRMVGVSGILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGSNSQTNATNEEEMGTKEEMQDWLLSVGIISPVTKESAGAMYHQQLSRQLADFVKVPLERAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDRGVMVIQTKSHSDEEVFAKIKVLVMKPDALRAGISASDAAMTLAVAPAMAKEHLLSAESKGILCRDISPDGFRFYINLFPEIDRDDMHVVKDQGIYASWVSANHAHG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2589 447 Pfam Vacuolar protein sorting protein 36 Vps36 11 102 IPR021648 GO:0032266|GO:0043130
Lja3g2589 447 Pfam EAP30/Vps36 family 182 406 IPR040608 -
Lja3g2589 447 ProSiteProfiles GLUE domain profile. 9 153 IPR021648 GO:0032266|GO:0043130
Lja3g2589 447 Gene3D - 10 154 IPR011993 -
Lja3g2589 447 SUPERFAMILY "Winged helix" DNA-binding domain 310 422 IPR036390 -
Lja3g2589 447 Gene3D - 197 271 - -
Lja3g2589 447 Gene3D - 273 349 IPR036388 -
Lja3g2589 447 Gene3D - 350 421 IPR036388 -
Lja3g2589 447 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 7 426 IPR037855 GO:0000814|GO:0032509|GO:0043130
Lja3g2589 447 SUPERFAMILY PH domain-like 5 127 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2589 3 35109413 35114937 Lja3g2589 3 35109413 35114937 ECH