Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2546 ATGGATGTTTGCAATGCTCAGGGGTTTGTGTATGGCATTATTGCTGAGAATGGGAAACCAGTATCTGGAGCATCTGAAAGCCTTAGCCTTTGGTGGCATGAAAAGGTTAATTTTGCTGGCAATGCTCCAATTGAAATTGCAAGACACAAAGCAAAGGAAGGAACTAGAGGCCACAATGAAGAGCTGAACTTGTTGCACAAAGATGGTTCAATTCTTAGTAGCTTGCATGAGCTTCAGGACTCGATTCTCTCGTCTCTTTTGTCGTCTCTGATGCAGAGTTGTAATCCTCCTCGAAGCAAGTACCCGTTCGAGATTGGTGTTCCTCCTCCTTGGTGGCCTAAAGGGGACGAGGAATGGTGGCCTCAATTGGGTTTCAGAAAGAATCCGGGTCCACCGCCTTATAGGAAACCTCATGATTTGAAAAAGATATGGAAAGTTGTTGTTCTCTCTGCTGTGATGAAGCACATTTCTCCAGATTTTCAAAAGATAAGAAGTGTTGTGCACCAATCTAAGGTCCTGCAAGAGAAGATGACTTCTAAGGAATCATATACTTTAATGGCTATTATAAACCAAGAGGAATTATTGGCTCAAAAACATATGGATCTAAAGAAGTTTAAAGATGTAAGCAGTGGTTCTAGTTCTTCTATGCTTCATGAGAGCAATTATTTTCGTGGTGGCACAAGTAATGTGGTGCAACCCAACCAACCCCACCATGCTAATTTGGTTGAAGTTAAAGAAAATGTTCCAAGAAATAGCAAGGTTTTGAGACCAACGGCTATAACAATGCAGCTAGGTGATTGCAATGGTGATAAATTGGAGGAACACAACCAACCTCAACATGATCATGTTGTCTTTGAAACTGAAGTAGGTGGTGCAAAATCAGATATGAGGTCCAACAATAATACAGGAAATCCTCATAATAACACCATGGGGATTCCTCATGTAGACCTGAACCATCAACTTCACTTAGAAAGGGAGAAGCATAACCCACCCTGCATTGGTGATATGGTTCAAGTGGAAGCAAATATTCCAAGAAACAACATGGTTTTGAGGCCAAGAATGGCTATAAAGAGAACTATGCAGCTGGGTGATTGCAATGGTGAAAATTTAGAGGAACACAATCAACCCCATAATGCTAATTTGGCTCAAGTGGAGGCAAATGTTCCAAGAAACAACATGGTTTTTAGGCCAATGGCTATAAGGAAAACCATACAGCAATGTTGTTCCATTTATACTTGTGAGAACCCTCCATGCCTTTATCATAATTACCATCTTGGGTTTCATGACAAGGCTACAAAAGATGATCACCAATTGAATTGCCCTTACAGAAGTAAATCTTTAACCATGCCTAGTTCTTCAAAACCTAAACCTGATCATGTTGTCATGGAAGTTGAAGTAGGTGGTGCAGAGCCAGATATGGTTCCTAATATGATGTCCAACAACAGTACATGCAGTGCTCAGAACAATGACATCGATTTTTCAAACATGTTTCCTCATGCCAACCTGAACCTACAACAACAACATCAACAACTTCACTTGGAAACAAATTTCTTTGGTTCAGGGCCTGCTGTCAATAGAAATCAATCTCTTGAATCAACCAAATCCCCTGCATCATCCTTTGAAACCTGA 1629 0.407 MDVCNAQGFVYGIIAENGKPVSGASESLSLWWHEKVNFAGNAPIEIARHKAKEGTRGHNEELNLLHKDGSILSSLHELQDSILSSLLSSLMQSCNPPRSKYPFEIGVPPPWWPKGDEEWWPQLGFRKNPGPPPYRKPHDLKKIWKVVVLSAVMKHISPDFQKIRSVVHQSKVLQEKMTSKESYTLMAIINQEELLAQKHMDLKKFKDVSSGSSSSMLHESNYFRGGTSNVVQPNQPHHANLVEVKENVPRNSKVLRPTAITMQLGDCNGDKLEEHNQPQHDHVVFETEVGGAKSDMRSNNNTGNPHNNTMGIPHVDLNHQLHLEREKHNPPCIGDMVQVEANIPRNNMVLRPRMAIKRTMQLGDCNGENLEEHNQPHNANLAQVEANVPRNNMVFRPMAIRKTIQQCCSIYTCENPPCLYHNYHLGFHDKATKDDHQLNCPYRSKSLTMPSSSKPKPDHVVMEVEVGGAEPDMVPNMMSNNSTCSAQNNDIDFSNMFPHANLNLQQQHQQLHLETNFFGSGPAVNRNQSLESTKSPASSFET* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2546 542 MobiDBLite consensus disorder prediction 517 542 - -
Lja3g2546 542 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 386 - -
Lja3g2546 542 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 398 510 - -
Lja3g2546 542 Pfam Ethylene insensitive 3 1 193 IPR006957 GO:0005634
Lja3g2546 542 Gene3D - 71 202 IPR023278 GO:0003700|GO:0005634
Lja3g2546 542 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 386 IPR006957 GO:0005634
Lja3g2546 542 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 398 510 IPR006957 GO:0005634
Lja3g2546 542 SUPERFAMILY DNA-binding domain of EIN3-like 73 195 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2546 Lja-Chr3 32923495 32925123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2546 411 452 EIL Transcription Factor Family AT2G27050 45.238 6.54e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lja3g2546 EIN3 7.2e-77 No_clan