Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2501 ATGGAAGAAGAGAATGCCATAGATCTTCTCCAGAGATACCGAAGGGACAGGCGAGTACTTCTCGATTTTATGCTTTCCGGGAGCTTAATCAAGAAAGTGGTAATGCCACCTGGTGCAGTTACTCTGGATGATGTGGATCTAGATCAAGTTAGTGTTGATTATGTGGTCAATTGTGCCAAAAAGAGTGTAACGCTTGAGCTTTCGGAAGCAATTAGAGATTATCATGATCATACTGGGTTACCCCAAATGAGTGACACAGGTTCAGTTGGTGAATTTTATTTGGTCACTGATCCTGAGTCTTCAGGTTCACCTCCTAAAAGGGCACCGCCACCTGTTCCAATCTCTGCTGCGCCTCCTGTTGCTGTCTCCACTCCACCACCTGCTTATCCAACATCTCCAATTGCTTCTAGTGTATCAAGATCAGAGTCTTTTAACTCCACACAAGAAAAGGAGCTAACGGTGGATGACATTGATGACTTTGAGGATGATGACAATGCTGCGATGGTTGATAGTCTCAGGGCTAAAAGGACTCTAAACGATGCTTCTGATCTTGCTGTAAAATTGCCTTCTTTTTCCACAGGGATCACAGATGATGATCTCCGTGAAACTGCATATGAGATCCTCTTGGCTTGTGCTGGAGCCACAGGGGGTCTGATTGTCCCATCTAAAGAAAAAAAGAAAGAAAAAAAATCCAGTTTGATTAGGAAGCTTGGGCGCAGCAAAAGTGGAAGTGTTGTATCCCAGTCTCAAAATGCTCCTGGATTAGTTGGCTTGTTGGAAACCATGCGTGTTCAATTGGAGATATCAGAGTCAATGGATATTCGAACAAAACAAGGGTTGCTAAATGCTCTTGCAGGAAAGATGGGGAAAAGGATGGATACTCTTTTGATTCCGTTGGAGTTGCTTTGCTGTATTTCACGCACAGAATTTTCTGATAAGAAGGCTTTTATACGTTGGCAGAAGAGGCAGTTAAAAGTTTTGGAGGAGGGTCTTATTAACCACCCTGTCACTGGATTTGGTGAATCTGTGCGCAAGTCAAACGAATTGAGGATTCTTTTGGCAAAGATTGAGGAATCTGAGTTTCTTCCTTCTTCAGCTGGTGAAATTCAAAGGGCAGAATGCTTGAGGTCTCTTAGGGAGATTGCCATTCCACTTGCTGAGAGGCCAGCTCGGGGTGACTTGACTGGTGAAATATGCCATTGGGCAGATGGTTACCACTTAAATGTCAGACTATATGAGAAATTACTTTTAAGTGTATTTGACATGCTAGATGAGGGAAAATTGACAGAGGAAGTGGAAGAAATTCTTGAACTTTTGAAATCGACTTGGCGAGTTTTAGGAATCACAGAGACAATCCATCATGCATGCTATGCATGGGTATTATTTCGTCAGTATGTTATCACAAGGGAGCAAGGGATTTTACTGCATGCAATTGAGCAATTAAATAAAACACCACTGATGGAACAACGAGGCCAACAGGAGAGATTGCACCTTAAAAGTTTGCATTCCAAGGTTGATGGTGAACGAGAGATGTCTTTCTTACAGTCTTTCTTAACACCAATTCAGAGATGGGCTGACAAGCAGCTCGGAGATTACCATCTGCATTTCAGTGAGGGTTCAGCAAATATGGAAAAGATTGTTGCAGTTGCAATGATTACCAGGAGGCTTCTACTGGAAGAACCCGAAACTACCGTGCAGTCATTGCCAATTAGTGATCGAGATCAGATAGAGATATATATAACATCATCAATTAAGAATGTATTTTCAAGGACACTGCAAGTTGTTGAAAGAATAGATATGTCACATGAGCATCCCTTGGCCTTGCTTGCAGAAGAACTCAAGAAGCTCCTGAAAAAAGATTCGGTAACTTTCATGCCTGTTTTATCTCAGAGACATCCTCAAGCAACTGTTGTATCTGCATCATTAGTTCACAAACTTTATGGGCACAGACTGAAACCCTTTCTGGATGGTGCAGAACATTTAACCGAGGATGTCATTTCAGTATTCCCAGCTGCTGAAAGTCTAGAGCAGTTCATAATGGCGCTTATTATTTCTGTATCTCAAGAAGAAAATGCTGAGATCTTGTTGAAGAAATTGAATCTCTACCAGATTGAGACAAAATCTGGAACATTGGTGCTACGCTGGGTCAATTCGCAGCTTGGAAGAATTTTAGGTTGGGTAGAGCGGGTTATTCAACAGGAGCACTGGGACCCAATATCTCCTCAACAGCGGCATGCTGGTTCTATTGTGGAAGTTTACAGAATTGTCGAAGAGACGGTTGATCAATTTTTTGGTCTGAAAGTTCCAATGAGGTTTACAGAATTGAATAGCTTGCTCCGTGGCATCGACAATGCTCTCCAAGTGTATGGAAATCTTGTTGTTAATGACTTGGCAAGCAAGGAGGACTTAATACCACCAGTGCCTGTTCTCACGCGATACAGAAAGGAAGCTGGAATAAAAGCTTTTGTGAAGAAGGAACTATTTGATGCTCGGGTGCCTGAGCCTGATGAAACAAAGCCCAGTGAAATTAGTGTCCTAACAACTCCAACACTTTGTGTTCAATTAAATACTTTATATTATGCGGTTAGTCATCTGAATAAACTGGAAGATAACATTTGGGAGCAATGGACAAGCAAGAGGTCCCAGGAAAAACTCATAAAGAAATCTGTTGATGAGAAGTCCAAAAAGGATACCTTTGATGGAAGTAGAAAAGTTATAAATGCGGCTATGGACCGCATTTGTGAGTACACTGGAACTAAAATAATCTTCTGCGATCTAAGAGTACCATTTATGGACAACTTATATAAATCCAGCGTCTTAGGAGCCAGGGTGGATGTACTTATAGAACCGCTTGATATGGAACTCAGCCAACTTTGTGATATTGTTGTGGAGCCCCTCAGGGATCGAATCGTGACAAGTCTTCTTCAAGCATCATTGGATGGCTTACTCCGCGTTATCTTAGATGGGGGTCCATCAAGAATTTTCTTTCCTGGTGATGCAAAATTACTAGAGGAAGATCTGGAGGTCCTTAAGGAATTCTTTATCTCTGGAGGTGATGGGCTTCCTCGGGGTGTCGTCGAAAATCAGGTTGCACGTGTGCGACATGTGATCAAGTTGCATGGCTACGAGACTCGAGAGCTGATAGAAGACCTGAGATCTGCTAGTGGCCTGGAAATGCATGGTGGCAAAAGCAAACTAGGAGCTGATTCCAAAACTCTGTTGAGAATATTATGCCATAGGAGTGACTCAGAAGCCTCTCAATTTCTGAAGAAACAATACAAAATGCCCAAATCTTCTGCATAA 3303 0.4223 MEEENAIDLLQRYRRDRRVLLDFMLSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVVNCAKKSVTLELSEAIRDYHDHTGLPQMSDTGSVGEFYLVTDPESSGSPPKRAPPPVPISAAPPVAVSTPPPAYPTSPIASSVSRSESFNSTQEKELTVDDIDDFEDDDNAAMVDSLRAKRTLNDASDLAVKLPSFSTGITDDDLRETAYEILLACAGATGGLIVPSKEKKKEKKSSLIRKLGRSKSGSVVSQSQNAPGLVGLLETMRVQLEISESMDIRTKQGLLNALAGKMGKRMDTLLIPLELLCCISRTEFSDKKAFIRWQKRQLKVLEEGLINHPVTGFGESVRKSNELRILLAKIEESEFLPSSAGEIQRAECLRSLREIAIPLAERPARGDLTGEICHWADGYHLNVRLYEKLLLSVFDMLDEGKLTEEVEEILELLKSTWRVLGITETIHHACYAWVLFRQYVITREQGILLHAIEQLNKTPLMEQRGQQERLHLKSLHSKVDGEREMSFLQSFLTPIQRWADKQLGDYHLHFSEGSANMEKIVAVAMITRRLLLEEPETTVQSLPISDRDQIEIYITSSIKNVFSRTLQVVERIDMSHEHPLALLAEELKKLLKKDSVTFMPVLSQRHPQATVVSASLVHKLYGHRLKPFLDGAEHLTEDVISVFPAAESLEQFIMALIISVSQEENAEILLKKLNLYQIETKSGTLVLRWVNSQLGRILGWVERVIQQEHWDPISPQQRHAGSIVEVYRIVEETVDQFFGLKVPMRFTELNSLLRGIDNALQVYGNLVVNDLASKEDLIPPVPVLTRYRKEAGIKAFVKKELFDARVPEPDETKPSEISVLTTPTLCVQLNTLYYAVSHLNKLEDNIWEQWTSKRSQEKLIKKSVDEKSKKDTFDGSRKVINAAMDRICEYTGTKIIFCDLRVPFMDNLYKSSVLGARVDVLIEPLDMELSQLCDIVVEPLRDRIVTSLLQASLDGLLRVILDGGPSRIFFPGDAKLLEEDLEVLKEFFISGGDGLPRGVVENQVARVRHVIKLHGYETRELIEDLRSASGLEMHGGKSKLGADSKTLLRILCHRSDSEASQFLKKQYKMPKSSA* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2501 1100 Gene3D - 708 915 - -
Lja3g2501 1100 PANTHER PROTEIN UNC-13 HOMOLOG 48 1099 - -
Lja3g2501 1100 MobiDBLite consensus disorder prediction 95 150 - -
Lja3g2501 1100 MobiDBLite consensus disorder prediction 103 132 - -
Lja3g2501 1100 MobiDBLite consensus disorder prediction 133 150 - -
Lja3g2501 1100 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 941 1051 IPR014772 -
Lja3g2501 1100 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 666 807 IPR014770 -
Lja3g2501 1100 PANTHER PROTEIN UNC-13 HOMOLOG 48 1099 IPR008528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2501 Lja-Chr3 31797246 31814772 Transposed