Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2493 ATGGGGCTGAGAAACTTGGGGTCATTTGGGCCTATTATAAAACAAGCGTGGGGATATTCATCCTTCTGTGTAAAGTTCGGCTGTTTTCTCCATGTTACCACCAAATATCTCATACTCCCTGTTACGACCTATGGTCCTAGCATGCTTCCTGCAATTGAATTGACTCCAAGCTTGTTTCTCACTGAAACCATCTCTGCCCGATCTGGTCAAGTTACTCGCGGAGATATTGTATGCTTGTGCTCACCTGCAAACCCCACAACGTTTATCACCAAACGCGTCGTTGGAATGGAGGGTGATACTGTTACATACTTACCTAGTCCCATGGACAGTGATCAACTTGAGACTATTGTGGTTCCAAAGGGTCATGTTTGGGTGGAGGGAGATAACATCTTTAACTCCAAGGATTCTAGAAATTTTGGTCCTGTTCCTTATGGCCTTATTCAGGGCAGGATATTTTGGAGGGTATTGCCACTTAAAGATTTTGGACCTTTTCTGAGAAGATGA 504 0.4405 MGLRNLGSFGPIIKQAWGYSSFCVKFGCFLHVTTKYLILPVTTYGPSMLPAIELTPSLFLTETISARSGQVTRGDIVCLCSPANPTTFITKRVVGMEGDTVTYLPSPMDSDQLETIVVPKGHVWVEGDNIFNSKDSRNFGPVPYGLIQGRIFWRVLPLKDFGPFLRR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2493 167 Gene3D Umud Fragment, subunit A 34 162 - -
Lja3g2493 167 CDD S26_SPase_I 40 151 IPR019533 GO:0004252|GO:0006465
Lja3g2493 167 Pfam Signal peptidase, peptidase S26 26 103 IPR019533 GO:0004252|GO:0006465
Lja3g2493 167 Pfam Signal peptidase, peptidase S26 114 155 IPR019533 GO:0004252|GO:0006465
Lja3g2493 167 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 165 - -
Lja3g2493 167 SUPERFAMILY LexA/Signal peptidase 36 164 IPR036286 -
Lja3g2493 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lja3g2493 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lja3g2493 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lja3g2493 167 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2493 Lja-Chr3 31698800 31699490 Dispersed