Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2490 ATGAAAATCCCACTTGTATTCACTCCTTTCCTCCTCCTCTTCTCCCTTGCACAAGGGCTGAACTCCCCCAAATGTGATTCTCATGATGATGGATCAACACTCAAAGTGTTCCATGTGTTCAGCCAATGTTCCCCATTCAGACCAGCAAAGGCAATGTCATGGGAAGAGAGTGTCCTGCAGCTGCAAGCCAAGGACCAAGCCAGGATGCAGTACCTCTCCAGCCTTGTTGCTAGAAGATCAGTTTTGCCCGTTGCCTCAGGGAGGCAGATCACACAGAGTCCAACATACATTGTCAGGGCCAAGATTGGTACCCCACCTCAGACCTTGCTACTGGCCATGGACACCAACAATGATGCTGCTTGGGTCCCTTGTACTGGCTGCGTTGGTTGCTCTTCACCAACACCTTTCTCTCCTGCTAAGTCCACCACTTTCAGGAACCTTACCTGTGGATCTCCTCAGTGCAACCAGGTACCCAACCCCACTTGCAGTGGAAGCGCGTGCAGTTTCAACCTGACATACGGCAGCTCCACCGTGGCAGCTAACTTGGTCCGTGACACACTGACCCTAGCAGCTGACCGAGTCCCAGGCTACACCTTTGGCTGCATTCAAAAGGCAACAGGGAGTTCAGTTCCACAGCAGGGGCTCTTGGGCCTGGGCCGAGGCCCGTTGTCACTTCTGGCCCAAACCCAAAACCTCTACAAATCTACATTTTCTTACTGTTTGCCCAGCTTCAAAGCACTCAACTTCACTGGATCACTGAGACTTGGGCTGGCCCAGCCCACTAGGCTCAAGTTTACTCCCCTTCTCAAAAATCCTCGGAGGTCATCACTCTACTATGTTAACTTGGTTGCTATCAAGGTTGGCCGGAAAATCGTTGATATCCCACCGGCAGCACTGGCGTTCAACCCAGCAACCGGCGCAGGCACAATTTTTGATTCTGGTACCGTATTCACCCGATTGGTTGAACCAGCTTACACAGCCGTCCGAAATGAGTTTCGACGACGAGTTGGTCGGAGAGTCCCCGTGACAACCCTAGGAGGGTTTGACACATGCTACACTGGGTCAATAGTTGTACCCCCAATAACATTCATGTTCTCCGGCATGAATGTTACACTTCCAACAGACAACATCGTCATACACAGCACCGCCGGAAGCATCACATGCTTGGCCATGGCAGTGACACCAAATAATGTGAACTCTGTGCTGAACGTGATTGCCAACATGCAACAACAAAACCATCGTGTGCTCTACGACGTGCCCAACTCAAGGCTTGGCATTGCTCGTGAGCTTTGCTCCTAA 1299 0.515 MKIPLVFTPFLLLFSLAQGLNSPKCDSHDDGSTLKVFHVFSQCSPFRPAKAMSWEESVLQLQAKDQARMQYLSSLVARRSVLPVASGRQITQSPTYIVRAKIGTPPQTLLLAMDTNNDAAWVPCTGCVGCSSPTPFSPAKSTTFRNLTCGSPQCNQVPNPTCSGSACSFNLTYGSSTVAANLVRDTLTLAADRVPGYTFGCIQKATGSSVPQQGLLGLGRGPLSLLAQTQNLYKSTFSYCLPSFKALNFTGSLRLGLAQPTRLKFTPLLKNPRRSSLYYVNLVAIKVGRKIVDIPPAALAFNPATGAGTIFDSGTVFTRLVEPAYTAVRNEFRRRVGRRVPVTTLGGFDTCYTGSIVVPPITFMFSGMNVTLPTDNIVIHSTAGSITCLAMAVTPNNVNSVLNVIANMQQQNHRVLYDVPNSRLGIARELCS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2490 432 ProSiteProfiles Peptidase family A1 domain profile. 96 427 IPR033121 -
Lja3g2490 432 Gene3D Acid Proteases 71 256 IPR021109 -
Lja3g2490 432 Pfam Xylanase inhibitor N-terminal 96 256 IPR032861 -
Lja3g2490 432 SUPERFAMILY Acid proteases 94 431 IPR021109 -
Lja3g2490 432 Pfam Xylanase inhibitor C-terminal 278 427 IPR032799 -
Lja3g2490 432 PANTHER ASPARTYL PROTEASES 7 432 IPR001461 GO:0004190|GO:0006508
Lja3g2490 432 PANTHER ASPARTYL PROTEASE AED3-LIKE 7 432 - -
Lja3g2490 432 Gene3D Acid Proteases 257 432 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2490 Lja-Chr3 31675054 31677856 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2490 3 31675054 31677856 Lja3g2490 3 31675054 31677856 ECH