Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja3g2474 | ATGGCAATGAGTGCAAGTTTATATGTTACCTGCGGTGAAACACATTTGTTTCCTTCGCATAATGTTTTTCAAAGATTCTTGAATTCTGCCATTCAGTCCATCCAGCAATGTGTTGCTCAAATTTTCGGCTCCGAACACGATATTATCGAACATGCCAGTTTTTGTGGTAGGATTTGCTGGGAAGAAGATATGGGGCTCTCATCTACTAATTATCTAATGTCAGCTATTGGGAGAAATTGCCAACTAAACTCCAAAGATTGTTCGTCCTATGACATGAGTTCTGGTCATGAGAAGGGCCAGCATGCTGTTTTCAATGCGTTGGATAATATGCTAAAGGGTAGTTTAGAGCGTCTGAAGATGATGAGGGAAAATATATCTTTGGTAAAGATAGGTCTTCGTGGATATGCATGTGAGTATAGCTACACTGAACATGCAGCCACTGTTAGGTTGTTGTGCTTGGAAGGTAAGTTGGAAGCAGCTATACGGCTTCAGAGAATAATGGTGCAGAAAGGTTTTCTTCCTGACGTCTTTACCCACAACCATATTGTAAATGGGTTGTGCAAAGTTGGCCTTATGGAGAAAGCGCATGATTGGCTTGTTAGAGAGATGCTGGAATTTGGTCCTCTTCCCAACCTTGTCACTTACAACACTTTAATTAAGGGCTATTGTACTGTTAATAGTGTAGATAAAGCTTTGTATCTGTACTCCAGCATGGCAGATACTGGTATTCAGCCAAACAGGGTCACTTGTAACATACTGGTACATGCATTGTGTGAGAATGGTCATCTGAAGGAAGCTAAAAAGATGCTTGAAGAAATACTAAATGATGATAAGGACATACCTGATTTAGTTACCTCTACTGTATTTATGGATCACTACTTTAAAAATAGAGAATTTATTCAGGCTTTCAGTCTTTGGAACGAGATGCGTCAAAATTCTATGGAAGTAGATGTTGTTGCTTATAATGTTCTTATCAATGGATTATGCAAGAATCAACTGATGAATCTTGCATATGGATATGCATGTGAGATGCTTAAGAAAGGTGTACTTCCTGATGCTTTTACATATAATATCCTTATCGGTGCTCTTTGGAAGGAAGGGAAAACTAGAGAAGCTTGCTATATTCTTGGAGTTATGTCTAAGATGGGAATTGTGCCAGATGAAATTTCATACAAGGTTATGATTCGAGGCCTTTGTTTTGATAGAGATATTGTTAGAGCAAAAGAGTTGCTTTGGTGTATGTTGAACAATTTAATGGTGCCCAAGCCTATAGTATGGAACCTAATAATTGACTTGTATGGAAGATGTAAAGATGTCAGTAATGCCATTTTAACAAGAGATCTGATGCTGAAATTCGGTGTTCACCCAAATGTCTTTACTTATAATGCTTTAATTCTTGCACACGTGAAGAGTGGAAATATCTATAGGGCTTACTCTCTGAAGGAAGAAATGCTTACAAAAGGTCTCTTTCCTGATGTGGTTACTTATAATTTGTTGATTGGTGCTGCTTGTAACTTACGAAGTCATGATTTTGCGCTTCAGTTACGTCGTGAGATGGTTCAAAAAGGGCACAGACCAGATTTAATAAGTTATACTGAACTTGTTAGGGAGTCCTGTATTAGAGGCAACACGAAAGAGGCAGAAGAGCGTTATGCGAAAATACTGAAATCTGGTTTAATGAATGATCATGTTCCAGTGCAGATTCTTTTTAATATGTACTGCAAATTGGAGGAACCAGTCAAGGCATTTAACTTATTTCAAGACTGGTTGGAAAGTAAACGGGATAGTTAA | 1791 | 0.3814 | MAMSASLYVTCGETHLFPSHNVFQRFLNSAIQSIQQCVAQIFGSEHDIIEHASFCGRICWEEDMGLSSTNYLMSAIGRNCQLNSKDCSSYDMSSGHEKGQHAVFNALDNMLKGSLERLKMMRENISLVKIGLRGYACEYSYTEHAATVRLLCLEGKLEAAIRLQRIMVQKGFLPDVFTHNHIVNGLCKVGLMEKAHDWLVREMLEFGPLPNLVTYNTLIKGYCTVNSVDKALYLYSSMADTGIQPNRVTCNILVHALCENGHLKEAKKMLEEILNDDKDIPDLVTSTVFMDHYFKNREFIQAFSLWNEMRQNSMEVDVVAYNVLINGLCKNQLMNLAYGYACEMLKKGVLPDAFTYNILIGALWKEGKTREACYILGVMSKMGIVPDEISYKVMIRGLCFDRDIVRAKELLWCMLNNLMVPKPIVWNLIIDLYGRCKDVSNAILTRDLMLKFGVHPNVFTYNALILAHVKSGNIYRAYSLKEEMLTKGLFPDVVTYNLLIGAACNLRSHDFALQLRREMVQKGHRPDLISYTELVRESCIRGNTKEAEERYAKILKSGLMNDHVPVQILFNMYCKLEEPVKAFNLFQDWLESKRDS* | 597 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja3g2474 | 596 | PANTHER | PPR CONTAINING PLANT-LIKE PROTEIN | 7 | 593 | - | - | |
| Lja3g2474 | 596 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | 7 | 593 | - | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 248 | 275 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 287 | 318 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 459 | 493 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 319 | 353 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 494 | 527 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 424 | 458 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 177 | 211 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 354 | 388 | IPR002885 | - | |
| Lja3g2474 | 596 | TIGRFAM | PPR: pentatricopeptide repeat domain | 213 | 246 | IPR002885 | - | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 457 | 491 | IPR002885 | - | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 211 | 245 | IPR002885 | - | |
| Lja3g2474 | 596 | Gene3D | Tetratricopeptide repeat domain | 277 | 341 | IPR011990 | GO:0005515 | |
| Lja3g2474 | 596 | Gene3D | Tetratricopeptide repeat domain | 202 | 276 | IPR011990 | GO:0005515 | |
| Lja3g2474 | 596 | Gene3D | Tetratricopeptide repeat domain | 69 | 201 | IPR011990 | GO:0005515 | |
| Lja3g2474 | 596 | Gene3D | Tetratricopeptide repeat domain | 342 | 417 | IPR011990 | GO:0005515 | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 352 | 386 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat family | 456 | 505 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat family | 317 | 363 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat family | 210 | 258 | IPR002885 | - | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 317 | 351 | IPR002885 | - | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 246 | 280 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat | 284 | 312 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat | 568 | 591 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat | 389 | 416 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat | 425 | 454 | IPR002885 | - | |
| Lja3g2474 | 596 | Pfam | PPR repeat | 170 | 197 | IPR002885 | - | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 422 | 456 | IPR002885 | - | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 492 | 526 | IPR002885 | - | |
| Lja3g2474 | 596 | Gene3D | Tetratricopeptide repeat domain | 430 | 596 | IPR011990 | GO:0005515 | |
| Lja3g2474 | 596 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 175 | 210 | IPR002885 | - |