Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2461 ATGGCTACTCATTTTATTTTTGCACTCTTTTCCCTTTACTTCTATTGTGCCATTTCTCTCACTCAATCTCTAAACAATGGTTTTAGTGTGGAACTCATCCACCGTGACTCTTTAAAATCTCCATTCTATAATCCCTCTAAAACTCCATTCCAAAGAGTTGCCAGTGCGGTGCATCGTTCCTTCAATAGTGCCAATCGTTTCAACAAAGCCTATGTTGGGAATGTTGTTCCAACAGACACAGCAGAATCAACTGTAGTCCCAGATAGAGGTGAGTATCTCATGAGTTATTCAGTTGGAACCCCGCCTTTCAAGCTTTATGGTATTGTTGACACCGGTAGTGATATTGTTTGGTTGCAATGCTTACCTTGTGAAACATGTTACAAACAAACCACTCCTATTTTTGATCCATCAAAATCCAAAACTTATAGAACCATTCCTTGCTCTTCTAAATGCGATTCTATTCGTTCTGCCTCTTGCTCTGATGGGCGAACTTGTCAGTACACTATCAACTATGGTGATAGGTCAAGGTCACAAGGAGATCTTAGCGCTGAAACTCTCACTTTGGAGTCCACAAGTGGCTCTCCCATTTCATTTCCAAAAACTGTGATTGGATGCGGACATAGCAATACGGTGTCGTTTCAGGGTCGAAGCTCTGGCATAGTAGGTCTTGGAGGTGGATCTATATCTCTTATAACTCAAATCGATTCTTCAATTGATGGGAAATTCTCCTATTGTTTGGTGCCAATGTTTTCAGCGTCAAACAGCTCGAGCAATCTCAATTTTGGGGACGCTGCTATTGTTTCTGGAGAAGGAACTGTCTCAACTCCCATTTTCCAAGGTGATGTTGATGTCTTTTACTACCTAACCTTGGAAGCAATTAGTGTGGGAGACAAGAGAATAGAATTTGGAAGCTCTGAATCTGGTCAAGAGGGAAATATCATAATTGACTCGGGCACAACACTGACTCTATTGCCAGATGATGTTTACTCCAATTTAGAATCAGCGTTGGTGGATGCGATGAAAGAAGAGCGTGTTGATGATCCAACTCAACAACTGAGCCTTTGTTACCAAATTTCATCAAAACAATTGGATGTTCCTACTATCACTGCACATTTTAAGGATGGAGATGTCACTTTGAATGCTCTCAACACTTTTGTTCAAGTTGCTGATAGTGTTGGATGCTTTGCATTTGCCCCTTCTCAAAGTGATGCCATCTTTGGGAACTTGGCACAACAAAACTTGTTGGTTGGCTATGACCTTCAGAACAAAGTTGTCTCCTTTAAGCCCACTGATTGTACCAAGTTGTGA 1308 0.4121 MATHFIFALFSLYFYCAISLTQSLNNGFSVELIHRDSLKSPFYNPSKTPFQRVASAVHRSFNSANRFNKAYVGNVVPTDTAESTVVPDRGEYLMSYSVGTPPFKLYGIVDTGSDIVWLQCLPCETCYKQTTPIFDPSKSKTYRTIPCSSKCDSIRSASCSDGRTCQYTINYGDRSRSQGDLSAETLTLESTSGSPISFPKTVIGCGHSNTVSFQGRSSGIVGLGGGSISLITQIDSSIDGKFSYCLVPMFSASNSSSNLNFGDAAIVSGEGTVSTPIFQGDVDVFYYLTLEAISVGDKRIEFGSSESGQEGNIIIDSGTTLTLLPDDVYSNLESALVDAMKEERVDDPTQQLSLCYQISSKQLDVPTITAHFKDGDVTLNALNTFVQVADSVGCFAFAPSQSDAIFGNLAQQNLLVGYDLQNKVVSFKPTDCTKL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2461 435 CDD pepsin_A_like_plant 91 432 IPR034161 -
Lja3g2461 435 Pfam Xylanase inhibitor C-terminal 286 428 IPR032799 -
Lja3g2461 435 Gene3D Acid Proteases 76 261 IPR021109 -
Lja3g2461 435 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 5 433 - -
Lja3g2461 435 SUPERFAMILY Acid proteases 85 433 IPR021109 -
Lja3g2461 435 Pfam Xylanase inhibitor N-terminal 92 263 IPR032861 -
Lja3g2461 435 Gene3D Acid Proteases 262 435 IPR021109 -
Lja3g2461 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 313 324 IPR001969 GO:0004190|GO:0006508
Lja3g2461 435 PANTHER OS07G0603500 PROTEIN-RELATED 5 433 - -
Lja3g2461 435 ProSiteProfiles Peptidase family A1 domain profile. 92 428 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2461 Lja-Chr3 30797546 30798853 Dispersed/Tandem