Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2460 ATGACACCTTGTTCAGTTCTTACCCTTTTGCTCTGCCTTTATTGTATCACCTCTCACGCTCATTCTCTAAACAATGGATTTAGCGTCGAACTCGTCCACCGTGACTCTTTGAAATCGCCATTGCATCGTCCCTCAGAATCTCAATTCCAAAAGGTGGCAAATTCCATGCGACGCTCCATCGGCCGTGCGGCCAAACGTTTCAATAAGGCTAATTACGCCCCTATAAACATACCTGAATCATCTGTAAGCCCAGATAGCGTTGGCGAATACATCATGAGTTATTCCATTGGCACGCCACCGGTTAAGGTCTTTGGCGATTTCGATACGGGAAGTGAAGTTGTTTGGTTGCAGTGCAACCCTTGTGAAAAATGTTACAATCAAACCACATCACCAATATTTGATCCTTCAAAATCCACAACATACACAAGCATTCCTTGCGCTTCTGAGTTATGTAAGTCTTTCAGTGATACCTATTGTGAAAAAACTACGTGTGAATATAATATTACATATGCTGATGGGACATACACAAAAGGAGATATCGGTGTGGATACTCTAACTTTGGACTCCACCAATGGCTCTCTTATCTCATTTCCAAGAACAGTGATAGGATGTGGGCATAACAATGCAGGGTTTGAGAAGGAAACCTCTGGTGTAGTTGGAATTGGAGTTGGGCCTGTGTCCCTTATATCTCAATTGGGCTCTTCAATTCATGGCTTCTCTTATTGTTTGGTACCGATTTTTTCAAACTCGAACGTCTCAAGCAAACTCAATTTTGGAGATGATGTTGTGATTTCAGGTAATGGGTCTGTCAATGTTCCCATAGTTCCTGGTAGTGACAAAATATTTTACTACTTTAATTTGGAAGCATTTAGTGTGGGTGACAAGAGAGTAGAGTTTGGAAACTCCTCTTCGGGCGGCGATGAGGGCAATATCATAATTGACACAGGCACGGTGCTGACCCTTCTTCCGCCCGATGATTATTCTCGGTTGGAATCGGCTGTGGCGGATGCGGTTAAATTGGAGCGTGTTCAAGATCCTAACAAAGTGTTAAGCCTTTGCTACAAAGCTACATTGAAACAATTGGAGTTTGTGAAAGTCACTGCACATTTTAAAGGTGCAGATCTTCAGCTGAATTCTCTAAATACTTTTGTTGAAGTTAGTGATGGAATTAATTGCTTGGCTTTTACTGCATCTGATATTGGTGCTACCTTTGGGAACTTGGCGCAGCAGAACTTCTTAATTGGCTACGACCTCCAGAAGAAAATTGTCACTTTTAAACCCACAGATTGCACCAAGGAGTGA 1302 0.4232 MTPCSVLTLLLCLYCITSHAHSLNNGFSVELVHRDSLKSPLHRPSESQFQKVANSMRRSIGRAAKRFNKANYAPINIPESSVSPDSVGEYIMSYSIGTPPVKVFGDFDTGSEVVWLQCNPCEKCYNQTTSPIFDPSKSTTYTSIPCASELCKSFSDTYCEKTTCEYNITYADGTYTKGDIGVDTLTLDSTNGSLISFPRTVIGCGHNNAGFEKETSGVVGIGVGPVSLISQLGSSIHGFSYCLVPIFSNSNVSSKLNFGDDVVISGNGSVNVPIVPGSDKIFYYFNLEAFSVGDKRVEFGNSSSGGDEGNIIIDTGTVLTLLPPDDYSRLESAVADAVKLERVQDPNKVLSLCYKATLKQLEFVKVTAHFKGADLQLNSLNTFVEVSDGINCLAFTASDIGATFGNLAQQNFLIGYDLQKKIVTFKPTDCTKE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2460 433 CDD pepsin_A_like_plant 89 430 IPR034161 -
Lja3g2460 433 Gene3D Acid Proteases 263 433 IPR021109 -
Lja3g2460 433 PANTHER OS07G0603500 PROTEIN-RELATED 7 431 - -
Lja3g2460 433 SUPERFAMILY Acid proteases 86 430 IPR021109 -
Lja3g2460 433 ProSiteProfiles Peptidase family A1 domain profile. 90 426 IPR033121 -
Lja3g2460 433 Pfam Xylanase inhibitor C-terminal 283 426 IPR032799 -
Lja3g2460 433 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 431 - -
Lja3g2460 433 Pfam Xylanase inhibitor N-terminal 90 260 IPR032861 -
Lja3g2460 433 Gene3D Acid Proteases 68 260 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2460 Lja-Chr3 30739525 30740826 Tandem