Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2451 ATGGAGCTCATAAAATGGGTTCTTTATTCTTTGGTTATTTTTCTGGTTCTGGTTAATGGGTCATTTGCATTGTACACTCCTCCTGAGAGTTATCTAATTGCTTGTGGTTCTTCCCAAAACATCACCTTCCAAGGTCACACTTATATTCCTGATTCACAGCATTCTTCATTTGTGTTGAAAACTGGGAACTCTGTTGTTGCTAGTTCCAATTCTAGTTCTAATGCCCCTTTTCCATTTTACCAATCAGCTCGGGTTTTCACCGAGAAAGCTTCTTACCGATTTGAAATTCGGAAAGAAGGTAGGCACTGGGTAAGGCTATATTTTTCCCCTCTTCCCAAATCCAGCCATGATTTGACTTCTGCTTCATTAACAGTGGTTACTGATGATTTTGTTCTCTTGAGCAACTTCAGCTTTAAGAAGCACAAGGGTTCTTTTATGTTCAAGGAGTATGCAATCAATGTTACTTCGGATATATTGGTTATGACCTTCATTCCTTCAAATGGTTCAGTTGCCTTTGTCAATGCAATTGAAGTTGTGTCGATGCCAAATGAGTTGTTTGCTGATCAGGCATTGGCTGTTGACCCGATAGCACCGTTTTCTGGACTTTCTGAACTTGCCTTTGAAACCGTTTATCGGGTGAACATGGGGGGTCCTTTGATCACTGCTCAAAATGACACCCTGGGTAGGACTTGGGTGAATGATCTGAAATACCTCCATATGAACAGCTCTGTGTTCAATGTGTCTGTCAACCCTTCGACCATCAAGTATCCGGAAGGTGTTACGCCTGAGACAGCCCCGAATTTGGTCTATGCCACTGCTGATACAATGGGGGATGCAAATGTGAATGACCAAAATTTCAACATTACTTGGGTCTTCCCTGTGGATCCAAATTTCTCTTATTTTGTCCGGGTGCACCTTTGTGATATTATGAGCAAGTCACTCAACACTTTAGTGTTTAATTTGTACATAAATTCTGACACAGCTCTTGTAAGTTTTGATCTCTCATCCATAACTAATGACTTGTCTGTGGCTTACTTCAAGGACTTCGTTTCCAATGTCTCAGCAGATTCTAGCACTTTGACTGTAAGTGTTGGTCCTGATTCAATGGCTGATCTCACAAATGCCACTATGAATGGATTGGAGATAATGAAGATCAGCAACGCATTAAAGAGCTTGGATGGGCTTTCTTCGGTTGACATTCTTCTTCCTAGTTCTAGTTCAAAGAAGAACATTGTAGGGATAATAGTTGGTTCTGTTGTTGGGGCTCTAGCTGCTGTAGCATTGGTTGGCTTGTGTTGTTGCTGCTTGGTGGGGCGCAAGTCGAAGTCATCTCCTCAACAGGGCGGCCATTCATGGCTGCCTTTACCCCTGTATGGAAACTCTCTGACCTTGACAAAGATGTCAACAACATCACAGAAGAGTGGAACTGCAAGCTGCATTTCTTTAGCTTCATCAAATCTGGGACGATTCTTCAGTTTCCAGGAAATCCTAGACGCGTCAAACAAATTTGATGAGAAGCTGCTACTTGGTGTTGGTGGATTTGGAAGGGTTTATAAGGGAACACTTGAAGATGGGACTAATGTGGCTGTTAAAAGGGGTAACCCGAGATCTGAGCAAGGTCTTGCAGAATTCCGAACTGAAATTGAAATGTTATCCAAGCTTCGCCACCGCCATCTCGTGTCTCTCATTGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTTTATGAGTACATGGCTAACGGACCCCTCCGGAGCCATTTGTATGGATCAGACCTGCCACCTCTATCGTGGAAGCAGCGGCTAGAAATTTGCATTGGATCAGCAAGAGGCCTTCATTATCTCCACACCGGAGCATCTCAGAGCATAATTCACCGAGACGTAAAGACAACAAATATCCTCTTGGATGAGAATTTTGTTGCGAAAGTTGCTGATTTCGGCCTCTCCAAAGCTGGCCCTGCTCTTGATCAGACCCATGTGAGCACTGCTGTGAAAGGAAGTTTCGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTCACTGAGAAATCTGATGTGTATTCATTTGGAGTAGTGTTAATGGAAGTGTTATGCACAAGACCAGCTTTGAACCCTGTACTTCCAAGGGAGCAGGTTAATATTGCTGAGTGGGCAATGAGCTGGCAGAAAAAAGGGATGCTTGAACAAATCATGGATAAAAATCTGGTAGGAAAGGTGAATCCCGCTTCGCTTAAGAAATTCGGGGAGACGGCCGAGAAGTGCTTGGCCGAGTACGGTGTGGACAGGCCGTCAATGGGAGATGTCTTGTGGAACCTTGAATATGCTCTGCAGCTTCAAGAGACCTCATCAGCACTCATGGAACCGGAAGATAACAGCACGAACCACATTACAGGAATTCAGTTGACACCCCTTGAGCATTTTGATAACAGTGTGAGTATGATTGAAGGGGGAAACTCGTGCACGGATGAGGATCCAGAAGATGTTGCCACAAGTGCAGTGTTCTCACAATTAGTTAATCCTCGCGGAAGATGA 2535 0.4379 MELIKWVLYSLVIFLVLVNGSFALYTPPESYLIACGSSQNITFQGHTYIPDSQHSSFVLKTGNSVVASSNSSSNAPFPFYQSARVFTEKASYRFEIRKEGRHWVRLYFSPLPKSSHDLTSASLTVVTDDFVLLSNFSFKKHKGSFMFKEYAINVTSDILVMTFIPSNGSVAFVNAIEVVSMPNELFADQALAVDPIAPFSGLSELAFETVYRVNMGGPLITAQNDTLGRTWVNDLKYLHMNSSVFNVSVNPSTIKYPEGVTPETAPNLVYATADTMGDANVNDQNFNITWVFPVDPNFSYFVRVHLCDIMSKSLNTLVFNLYINSDTALVSFDLSSITNDLSVAYFKDFVSNVSADSSTLTVSVGPDSMADLTNATMNGLEIMKISNALKSLDGLSSVDILLPSSSSKKNIVGIIVGSVVGALAAVALVGLCCCCLVGRKSKSSPQQGGHSWLPLPLYGNSLTLTKMSTTSQKSGTASCISLASSNLGRFFSFQEILDASNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGSDLPPLSWKQRLEICIGSARGLHYLHTGASQSIIHRDVKTTNILLDENFVAKVADFGLSKAGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLEQIMDKNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTPLEHFDNSVSMIEGGNSCTDEDPEDVATSAVFSQLVNPRGR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2451 844 ProSiteProfiles Protein kinase domain profile. 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2451 844 Pfam Malectin-like domain 33 385 IPR024788 -
Lja3g2451 844 Pfam Protein tyrosine and serine/threonine kinase 508 770 IPR001245 GO:0004672|GO:0006468
Lja3g2451 844 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Lja3g2451 844 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Lja3g2451 844 Gene3D Transferase(Phosphotransferase) domain 1 579 803 - -
Lja3g2451 844 PANTHER OS07G0166700 PROTEIN 17 836 IPR045272 GO:0004714|GO:0006468
Lja3g2451 844 CDD STKc_IRAK 509 774 - -
Lja3g2451 844 SMART serkin_6 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g2451 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lja3g2451 844 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 17 836 - -
Lja3g2451 844 Gene3D - 205 387 - -
Lja3g2451 844 Gene3D - 30 182 - -
Lja3g2451 844 SUPERFAMILY Protein kinase-like (PK-like) 482 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2451 Lja-Chr3 30339635 30343292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja3g2451 Malectin_like 9.9e-38 CL0202