Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2446 ATGGCGAATGGTGAAAGGTTGAAAGTTGCTGCTCAAACAGGTGACATAAATATTCTCTACACACTAATTCAGGAAGATCCATACATTTTGGATTACATAAATTCAATACCATTTGTTCAAACCCCTTTGCATGTTGCTGCATATGAGGGGCATCTCCAGTTTGCCACTGAGGTTATGAGGTTGAAACCTTCATTTGCATGGAAGCTAAATCAGCAAGGTTTCAGTCCCATCCACCTTGCTATGCAAAACGACCAACAGAGTATGGTGTTACGCTTTATAGAGGTGGATAGCAATCTTGTTCGAGTCAAAGGGAGGGAAGGTTTAACTCCTTTGCATCTTGCAAGTCAAATAGGTGAAGTTGACCATTTAGCTATCCTCCTCTATGCTTGCCCTGATTCCATTGAAGATGTCACTGTGAAAAGTGAGACCGCACTGCACATTGCTATAAAAAATAAACACTACGAGTCCCTTCAAGTCCTGATTGGCATGCTAAAGAAAAATCGCGAGAGAGGTTCTAAGGAGATGGAAAATAGGATTCTAAATTGGAAGGATGAGGTAGGCAACACCATTTTGCACATCTCAGCACTCACCAATTTTTTTATAAGCCAAAGAATTGCAATTGGATTGTTGGTGAAGACTGGGATTAATTTGAATGCAAAGAATTCGGAGAACAAAACAGCATTAGACATGGCAGCCAGTGCTGAGATCAAGACTAAATTGTCCAAAGCTGGAGTAAAACTTGGCTCATCAGACGTCACTAATGCTCCCACATTTGCAGATGAGCTAAGATCGAAGACCAAATTTGTGGATAAAATTATACTCCCTCCGGTCCTATTTATAAGCATGAAAGAGAAGAAAAACCTTGAGGAACAAAGAAATGCTTTTTTGGTAATTGCTGCTCTTGTTGCAACAGCCACCTATCAGGCAACACTGAGCCCCCCTGGCGGGCTTTTCCAGGCAAATGCCGAAGACCTTATAGCCACATTATACCAAGCGAAATCAGCCTTGCCTCCGGTTGTTTTCCTTTTCTTTTACACCTTGAACACACTTACCTTTGCGATGTCAATTATGAAATTATATATTCTGACCCCAAGTGGGAAAATGGGAAGAATGTTGTACCTCCCAGTGTTCTGGTTTGCCACATGTTATCTCTTTGCTATGCACGTGATATCGCCTACCTGGATTCTCAGTACCATTCTGTCCTGCATATTCTGCTTCTTGTTCCTTGTGGTGTCTTGGTCATTTTTCTCAGTGTCCAAATCTCGCATTCATGCCACGAACAGGGAAATCAGCTCCAGGAATAGTGCAGGTGGAAATAAATGGTAG 1326 0.4193 MANGERLKVAAQTGDINILYTLIQEDPYILDYINSIPFVQTPLHVAAYEGHLQFATEVMRLKPSFAWKLNQQGFSPIHLAMQNDQQSMVLRFIEVDSNLVRVKGREGLTPLHLASQIGEVDHLAILLYACPDSIEDVTVKSETALHIAIKNKHYESLQVLIGMLKKNRERGSKEMENRILNWKDEVGNTILHISALTNFFISQRIAIGLLVKTGINLNAKNSENKTALDMAASAEIKTKLSKAGVKLGSSDVTNAPTFADELRSKTKFVDKIILPPVLFISMKEKKNLEEQRNAFLVIAALVATATYQATLSPPGGLFQANAEDLIATLYQAKSALPPVVFLFFYTLNTLTFAMSIMKLYILTPSGKMGRMLYLPVFWFATCYLFAMHVISPTWILSTILSCIFCFLFLVVSWSFFSVSKSRIHATNREISSRNSAGGNKW* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2446 441 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 10 420 - -
Lja3g2446 441 ProSiteProfiles Ankyrin repeat region circular profile. 106 127 - -
Lja3g2446 441 PANTHER HOMEOBOX PROTEIN WARIAI 10 420 - -
Lja3g2446 441 SUPERFAMILY Ankyrin repeat 8 234 IPR036770 -
Lja3g2446 441 SMART ANK_2a 72 101 IPR002110 GO:0005515
Lja3g2446 441 SMART ANK_2a 106 136 IPR002110 GO:0005515
Lja3g2446 441 SMART ANK_2a 2 32 IPR002110 GO:0005515
Lja3g2446 441 SMART ANK_2a 38 67 IPR002110 GO:0005515
Lja3g2446 441 SMART ANK_2a 140 170 IPR002110 GO:0005515
Lja3g2446 441 SMART ANK_2a 186 219 IPR002110 GO:0005515
Lja3g2446 441 ProSiteProfiles Ankyrin repeat profile. 106 127 IPR002110 GO:0005515
Lja3g2446 441 Pfam Ankyrin repeats (3 copies) 97 161 IPR002110 GO:0005515
Lja3g2446 441 Pfam Domain of unknown function 286 393 IPR026961 -
Lja3g2446 441 Gene3D - 3 255 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2446 Lja-Chr3 30237049 30244830 Dispersed