Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2426 ATGGCATTGGCAGCAACACTGATGGCAGCCACAGCAAGCACCAGCACTGTTCTTAAACCAACCCCTTTCCTTGGTCAAAGTAGGGGAACCAACACCAACCCTCTTAGAGATGTTGTCTCCATGGGACCTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTAGGACCCTTTTCAGCTCAGACCCCTTCATACTTGACTGGAGAATTCCCAGGGGACTATGGATGGGACACTGCTGGATTGTCTGCTGATCCTGAAGCATTTGCCAGGAACAGGGCTCTTGAGGTGATTCATGGACGTTGGGCCATGCTTGGAGCACTAGGCTGCATCACCCCTGAAGTACTTGAAAAGTGGGTTAGAGTGGACTTCAAAGAGCCAGTTTGGTTCAAAGCTGGAGCTCAGATATTCTCAGAAGGTGGCCTTGACTACTTGGGGAATCCCAACCTTGTTCATGCACAGAGCATCCTAGCAGTGCTAGCCTTCCAAGTTGTGCTCATGGGTCTTGTTGAAGGATTCCGGATCAACGGCCTTCCGGGAGTTGGAGAGGGCAACAACCTCTACCCTGGTGGACAGTACTTTGACCCTCTTGGCCTTGCTGATGACCCTGTCACTTTTGCTGAGCTTAAGGTTAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTCCAAGCCATTGTCACCGGGAAGGGACCACTGGAGAACCTATTGGATCACCTTGATGACCCTGTGGCTAACAATGCTTGGGTCTATGCTACCAAGTTTGTGCCTGGTTCTTGA 816 0.4988 MALAATLMAATASTSTVLKPTPFLGQSRGTNTNPLRDVVSMGPGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLAFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPGS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2426 271 Gene3D Chlorophyll a/b binding protein domain 60 264 - -
Lja3g2426 271 SUPERFAMILY Chlorophyll a-b binding protein 52 268 - -
Lja3g2426 271 Pfam Chlorophyll A-B binding protein 70 237 IPR022796 -
Lja3g2426 271 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 9 271 - -
Lja3g2426 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 9 271 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2426 Lja-Chr3 29809152 29811346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2426 15 270 Chloroplast and Mitochondria Gene Families AT2G05070 68.302 1.66e-123 351