Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2418 ATGGGGGATGGCAATGGCGTTAGAACGTTGAAGGATTTTTCGATTCCGGATTACATACTATTACCCGGAACTGAGATTCGAACTTCTTCCCATGTTCCAACATGTCCTGTGATTGTCTTCATTAATACCAAAAGTGGTGGTCAGCTTGGAGGGGAGCTTCTTGTCACCTATAGTACACTTCTTAACAAAAACCAGGTTTTTGATTTGGGGGTGAAAGCTCCAGACAAGGTGCTGCATCAGCTTTATGCTAATTTAGAAACGCTCAAGCACAAAGGGGATAATTTCGCTGCCGAAGTTCAGAATAGGTTGAGGATAATTGTTGCAGGTGGAGATGGTACTGCCAGCTGGCTTCTTGGGGTAGTAGCTGACCTGAAATTACCTCGGCCACCGCCAGTTGCAACAGTGCCACTGGGGACTGGAAATAATCTCCCCTTTGCATTTGGATGGGGAAAGAAAAATCCAACCACAGACATCCAATCAGTGGGGTCATTCCTGAATCTAGTAAGATCTGGAAAGGAAATGAAAATAGACAGCTGGCATATTACAATGAGAATGAGGGCCCCAAAAGAAGGTTCATGTGACCCGATTGCACCCCTTGAGCTTCCACATGCTCTGCATGCATTTCACCGTGTCTCTTCAACAGATAAACTAAACTTGGAAGGTTATCACACTTACCGTGGGGGATTCTGGAACTACTTTAGCATGGGAATGGACGCCCAAATATCCTATGCATTTCATTCTGAAAGGAAGTTACATCCAGAAAAGTTTAAAAACCAGTTATATAATCAGAGTGCCTATCTGAAGCTTGGATGTCAACAAGGATGGTTCTTTTCTTCTCTGTTCCAATCGTCGCGGAATATTGCTCAGCTGACAAAGGTTAAGATAATGAAAAAGCAAGGTCAGTGGGAAGACCTCCACATACCTCGCAGCATACGATCAATAGTTTGCCTCAACTTGCCTAGCTTTTCTGGTGGACTCAATCCTTGGGGAAAACCAAATAAAAAGAAATCAGCTTATAGGGACCTGACTCTTCCCTTTGTGGATGATGGCATGTTTGAGGTTGTCGGTTTCAGAGATGCTTGGCATGGTCTTGTATTGTTAGCACCAAATGGGCACGGGACTCGTTTGGCACAGGCAAGCAAAATCCGTTTTGAGTTTCACAAGGCTGCAGCAGCTGACTGCACATTCATGAGAATTGACGGAGAACCATGGAAACAACCCCTCCCTCAGGATGATGACACAGTTGTTGTTGAGATATCTCATCATGGTCAAGTGAACATGCTTGCCACCCCATTATGCCGCTCTAAAAGTGTGCATGACCCCTCCTCACCCTCTGTAGACCATGAAGAAGAAGATAGCAGTGATGACGAATCATCAGAAAATTGGGAAGAGCGTCGCAAGTTTGGTGCAGCTGAGACATTCAAATATCCCGATGGAACTGATGAGGCTCACATAAGTTAG 1461 0.449 MGDGNGVRTLKDFSIPDYILLPGTEIRTSSHVPTCPVIVFINTKSGGQLGGELLVTYSTLLNKNQVFDLGVKAPDKVLHQLYANLETLKHKGDNFAAEVQNRLRIIVAGGDGTASWLLGVVADLKLPRPPPVATVPLGTGNNLPFAFGWGKKNPTTDIQSVGSFLNLVRSGKEMKIDSWHITMRMRAPKEGSCDPIAPLELPHALHAFHRVSSTDKLNLEGYHTYRGGFWNYFSMGMDAQISYAFHSERKLHPEKFKNQLYNQSAYLKLGCQQGWFFSSLFQSSRNIAQLTKVKIMKKQGQWEDLHIPRSIRSIVCLNLPSFSGGLNPWGKPNKKKSAYRDLTLPFVDDGMFEVVGFRDAWHGLVLLAPNGHGTRLAQASKIRFEFHKAAAADCTFMRIDGEPWKQPLPQDDDTVVVEISHHGQVNMLATPLCRSKSVHDPSSPSVDHEEEDSSDDESSENWEERRKFGAAETFKYPDGTDEAHIS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2418 486 Pfam Diacylglycerol kinase catalytic domain 36 161 IPR001206 GO:0016301
Lja3g2418 486 Gene3D - 228 409 - -
Lja3g2418 486 MobiDBLite consensus disorder prediction 432 486 - -
Lja3g2418 486 Pfam Diacylglycerol kinase accessory domain 229 403 IPR000756 GO:0004143|GO:0007205
Lja3g2418 486 MobiDBLite consensus disorder prediction 459 486 - -
Lja3g2418 486 PANTHER DIACYLGLYCEROL KINASE 9 483 IPR037607 GO:0004143|GO:0007165
Lja3g2418 486 SMART dagk_c4b_2 231 403 IPR000756 GO:0004143|GO:0007205
Lja3g2418 486 Gene3D - 35 182 IPR017438 -
Lja3g2418 486 SMART dagk_c4a_7 36 179 IPR001206 GO:0016301
Lja3g2418 486 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 35 428 IPR016064 -
Lja3g2418 486 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 32 185 IPR001206 GO:0016301
Lja3g2418 486 PANTHER DIACYLGLYCEROL KINASE 9 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2418 Lja-Chr3 29614845 29621395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2418 10 478 Acyl Lipid Metabolism Gene Families AT2G20900 71.218 0.0 679