Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2219 ATGGAAATCCTTCAAGCAGCATCAGACAAGAAGGTGCAGCAGAGCTCCAAGAGATTCACTACATCCTTAGTTGCATTTTTCATAGCGCTTCCTGTTGTCATAATTACTCTAACTATGTACTCAAATCCAAGCGTAATGGATAATATTATCACAACCAGCGCCATCCCATTGGGAGGAATTAGAGTCCTTAATATATCAGATGACAACATTAGCACTGAGTCAGAGGTGGGAGAGAAACTTCAAAATGACAAAGAAAAACTGCTTCATGGATTACTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGACTGCAATCTCACTTGTACCGCAAACCTTCTCCTCACAACCCATCTCCATATTTGATATCTAAACTACGAAGCTATGAACAAATTCACAGAAGGTGTGGTCCTAATACCAGAGCTTACCACAGAAGCATGACAAAGATTGTTAAGAACCATGGTGCTTCTGCTTCTGCTTCTGCTTCTGCAATGTGTAAATACATCGTGTGGACACCTGCCAATGGTTTGGCCAATCAAATGCTTAGCATAGCAGCAACTTTTCTTTATGCAATCCTCACAGACAGAGTGTTGCTTGTGAAAATTGGGGAAGACAAGCATGGTTTGTTTTGTGAGCCATTTCTCAATTCAACTTGGATTTTGCCTGAAAAGTCTCCATTTTGGAATGTGGGGCAGCAAGTCCAAACATATCAAAGCATACTACAGAAAAACATGGCTAATAATAGCACTATAGAGGAGCATTTACTACCATCAGTTCTGTTTGTTAATCTAGCACACACACGCGATGATCCTGAGAAATTTTTTCACTGTAATCACAGTCAAGATCTTCTCAAGAAGGTTCCTTTGTTGATTTTGCAGTCAGATCAGTACTTTGTCCCTTCTCTGTTCATGACCCCAATTTTCAATTTGAAGATCAACAAAATGTTCCCAGAAAAAGACACAATTTTCCACCATTTGGGGCGCTACCTTTTTCATCCTTCAAATGAGGCATGGAGACTAATCAGCAAGTTCTATCAGGAACATTTAGCAAATGCAGCTGAGAAATTAGGCCTCCAGATAAGACTGTTTAACGGTGATTCTGTTCCAAAACAAGCTGTTATGGATGTACTTATGAGCTGCACCTTAGAGAATAAGCTACTACCAGAAATTAGTACACAAAATTCAGTGTCTTCTAGTGTCAAAAACCTCACTGTAAAGGCTGTTCTGGTGGCATCTTTGTATCAAGATATTGGTGACAATTTAAGGGCTATGTATCTAAAAAGACCAACTGTGACAGGGGAATTAATAGAGGTTTTTCAACCAAGTCATGAAGGGCACCAAAAGATTAACGATTATGAACACTATTTGAAGGCCTGGACTGATATTTATCTACTTAGTTTATCTGATGTGTTGGTAACTACACATATGTCTACTTTTGGTTATGTTGCTCAGAGTTTGGGGAATTTGAGGCCATGGCTTCTTTACCAGCTGGCTAGTAATGACACGCGTGTTCCGCAATGTACACAGGACTTCTCAATGGAGCCTTGCTATCATTTTGCTCCCAGGCATTACTGCAATGGAATGCCCATTGAAGATTTTTCTTCTTTCCTTTACTTGAGGAAATGCAAGGATATTTCTACTGGTGTGAAGCTAGTCAACGATCCTGTATAG 1671 0.3986 MEILQAASDKKVQQSSKRFTTSLVAFFIALPVVIITLTMYSNPSVMDNIITTSAIPLGGIRVLNISDDNISTESEVGEKLQNDKEKLLHGLLASGFDEASCISRLQSHLYRKPSPHNPSPYLISKLRSYEQIHRRCGPNTRAYHRSMTKIVKNHGASASASASAMCKYIVWTPANGLANQMLSIAATFLYAILTDRVLLVKIGEDKHGLFCEPFLNSTWILPEKSPFWNVGQQVQTYQSILQKNMANNSTIEEHLLPSVLFVNLAHTRDDPEKFFHCNHSQDLLKKVPLLILQSDQYFVPSLFMTPIFNLKINKMFPEKDTIFHHLGRYLFHPSNEAWRLISKFYQEHLANAAEKLGLQIRLFNGDSVPKQAVMDVLMSCTLENKLLPEISTQNSVSSSVKNLTVKAVLVASLYQDIGDNLRAMYLKRPTVTGELIEVFQPSHEGHQKINDYEHYLKAWTDIYLLSLSDVLVTTHMSTFGYVAQSLGNLRPWLLYQLASNDTRVPQCTQDFSMEPCYHFAPRHYCNGMPIEDFSSFLYLRKCKDISTGVKLVNDPV* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2219 556 Pfam Xyloglucan fucosyltransferase 79 525 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2219 556 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 69 554 - -
Lja3g2219 556 PANTHER FUCOSYLTRANSFERASE 2-RELATED 69 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2219 556 Gene3D - 163 261 - -
Lja3g2219 556 Gene3D - 339 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2219 Lja-Chr3 26399860 26402087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2219 16 552 Xyloglucan Fucosyltransferase1 AT2G03220 44.156 9.58e-157 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2219 K13681 - gmx:100809919 689.493