Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2218 ATGGAAATCCTTCAAACCGCACTGGACAAGATGGAGCAGAGTTTCAAGAGATTCATGACACCCTTTGCTGTATTTTTCATAGCTTTTCCTATTCTCATAGTCACTCTCATCATGTACAGAAACTCAAACTCTACACTTTTTGAGGGTGTATCAGAAAGCGTTGAACTCGGTGCAAAAACTCATAATGTTTCAAATGAGTTGGGAAGTACAGGGTCAAACAACACAACCAACGGTGGTGGTTTTCCATTGGGGGGAAAAGCAAGAGTGCATAATATATCAGATCAGAATATAGGAGATGGAATTGAAAGGCATAATAAAACTGTGTCAGAGGTCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATAATCTCTCATCCAAAGTAGGCTCCAAAAATGACTCCCTTGTTGTTACAAGTTCAACAAATGATTCAACAGCGCGTGTTGAAATCCGTCAAAACGAAGACAAATTGCTTCATGGATTACTAGCTTCTGGATTTCATGAATCATCATGCTTAAGCAGATTTCAATTCCACTTATACCGCAAAGCTTCTCCTCACATACCCTCTCCATATTTGATATCTAAATTAAGAAACTATGAAGAAATTCATAGAAAGTGTGGACCAAATACTAGAGCTTTCGACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGCTATTGCTACAATGTGTAAGTACCTTGTCTGGACACCTGCCAATGGTTTAGGAAACCAAATGATTAGCATAGTTGCAACATTTCTCTATGCAATCCTCACAGACAGAGTGTTGCTTGTGAGATTTGGGAAAGATAAACATGGTTTGTTTTGCGAGCCATTTCTCAATGCAACTTGGATACTACCTCAAAACTCTCCATTTTGGAATGATAATCATGTTGAAACATACAAGAGCCTGCTAGAGAAGAACAAGAGTAACAACACTTCAAAGGGGCATTTACCATCCTCCGTGTTTCTTCATCTACAACACACCCGCGATGATCCTGAGAAGTTTTTTCACTGCGACCACAGTCAAGATCTTCTCAAGAAGATTCCTTTGTTGATTTTGCAGTCAGATCAGTATTTTGTCCCATCTCTGTTCATGACTCCATTTTTCAATTCCAAGATTGACAAAATGTTCCCAGAAAAAGACACAATTTTCCACCATTTGGGGCGCTACCTTTTTCACCCTTCAAATGAGGCATGGAGACTAATCAGTGGATTCTATCAGAAAAACTTGGCCAAAGCAGATGAGAGAATAGGCCTACAGATAAGAGTATTTAATCCTGCCACTCCAAAACAATCAGTTATGGAATTAATTTTTAGCTGCATCATTAAAAATCAGCTATTACCAGAAGTACTTGGTATGAAAAATTCAGTGTCTTCTAGTAGCAAAAACAAGACTGTAAAAGCTGTTTTAGTGGCATCTTTATATCCAGAATATGGTGAGAATTTAAGGGCTATGTATCTGAGAAAACCAACAGTAACAGGGGAAGTAGTGGAGGTTTATCAAGCAAGTCATGAAGAACATCAAAAGTTCAATGATAACATGCATAATATCAAGGCCTGGGTGGACATGTATCTACTGAGTTTATCTGATGTGTTGGTCACTACCTCTCTATCTACTTTTGGTTATGTTGCTCAGGGTTTGGGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCGGGTAACGAAAAACATTTTCCAACCTGCAAACGGGACTTCTCAATGGAACCTTGTTATCATATTCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTTGGTTATTTGATGAAATGCAAGGATTTTTCTTTTGGAGTGAAGCTGGTCAATGGTTCTGTGTAG 1896 0.3855 MEILQTALDKMEQSFKRFMTPFAVFFIAFPILIVTLIMYRNSNSTLFEGVSESVELGAKTHNVSNELGSTGSNNTTNGGGFPLGGKARVHNISDQNIGDGIERHNKTVSEVRDQKIQNVTAATEGTVTANNNNLSSKVGSKNDSLVVTSSTNDSTARVEIRQNEDKLLHGLLASGFHESSCLSRFQFHLYRKASPHIPSPYLISKLRNYEEIHRKCGPNTRAFDRSIVKIVRSKNNGAIATMCKYLVWTPANGLGNQMISIVATFLYAILTDRVLLVRFGKDKHGLFCEPFLNATWILPQNSPFWNDNHVETYKSLLEKNKSNNTSKGHLPSSVFLHLQHTRDDPEKFFHCDHSQDLLKKIPLLILQSDQYFVPSLFMTPFFNSKIDKMFPEKDTIFHHLGRYLFHPSNEAWRLISGFYQKNLAKADERIGLQIRVFNPATPKQSVMELIFSCIIKNQLLPEVLGMKNSVSSSSKNKTVKAVLVASLYPEYGENLRAMYLRKPTVTGEVVEVYQASHEEHQKFNDNMHNIKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLQRLAGNEKHFPTCKRDFSMEPCYHIPPKHFCNGKPIEDFASSFGYLMKCKDFSFGVKLVNGSV* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2218 631 Pfam Xyloglucan fucosyltransferase 160 599 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2218 631 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 15 630 - -
Lja3g2218 631 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 630 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2218 631 Gene3D - 414 570 - -
Lja3g2218 631 Gene3D - 240 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2218 Lja-Chr3 26396185 26398631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2218 147 628 Xyloglucan Fucosyltransferase1 AT2G03210 46.559 5.36e-150 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2218 K13681 - gmx:100809919 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5263 3 94852331 94856720 Lja3g2218 3 26396185 26398631 PCT