Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2217 ATGGAAATCCTTCAAGCCACTCTGGACAAAATGGAGCAGAGTTTCAAGAGATTCATGACACCCTTTGTTGTATTTTTCCTAGCTTTTCCTGTTCTAATAGTCACTCTAATCATGTACAGAAACTCAAACTCAACACTTTTTGAGGCTGTATCAGAAAGCGTTGAACTCAGAGCAAAAACTCATAACATTTCAAATGATGAGTTGGGAAGTACAGGGTCAAACAACACAACCAACGGTGGTTTTCTATTGGGGGGAAGAGGAAGAGTGCATAATATATCAGATCAGAACATAGTAGGAGATGGAATTGTAAGGCACAATAGTTCTGTGTCAGAGGTCAGAGATCAGAAAATTCAAAACGTTACAGCTGCTACTGAAGGAACAGTTACAGCTAACAATAATAATCTCTCATCCAAAGTAGGCTCAAAAAATGACTCACTTAATACAAGTTCGACAAATGATTCAGCAGCGCATGTTGAAATTCCTGATGTCAAAGACAAATTGCTTCATGGATTGCTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGGGTACAATCCCAATTTTATGGCAAAGCTTCTCCTCATAGACCCTCTTCATATTTGGTATCTAAATTAAGGAACTATGAAAAAATTCATAGAAAGTGTGGACCAAATACTAGAGCTTACAACAGAAGCATAGTAAAGATTGTTCGTTCTAAGAACAATGGTGCTGTTGGTACAATGTGTAAGTACCTTGTTTGGACACCTGCCAATGGTTTGGGAAACCAAATGATTAGCATAGTTGCAACATTTCTCTATGCAATCCTCACTGACAAAGTGTTGCTTCTGAGATTTGGGAAAGATAAACATGGTTTATTTTGCGAGCCTTTTCTCAATTCAACTTGGATTTTACCTCAAAAATCTCCATTTTGGAATGATAATCAGGTCGAAACATACAAGAGCATGCTAGAGAAGGACAAGAGTTACAACACTTCAAAGGGGCATTTACCATCCTCTGTGTTTCTTAATCTAGCACACACCCGCGATGATCCTGAGAAGTTTTTTCACTGCGATCATAGTCAAGAACTTCTAAAGAAGGTTCCTTTGTTGATTCTGCTGTCAGATCAGTATTTTGTCCCTTCTCTTTTCATGACCCCAATTTTCAGTTGGGAGATTAACAAAATGTTCCCAGAAAAAGACACACTTTTCCACCATTTGGGGCGCTACCTTTTTCACCCTTCAAATGAGGCTTGGAGTCTAATCACCGGGTTCTATCAGAAAAACTTGGCTAAAGCAGATGAGAGAATAGGCCTACAGATTAGAGTATTCAATCATGCTTCCACTCCAAAACAATCAGTTATGGAATTAATTTTGAGCTGCATCATTAAAAATCAGCTAATACCAGAAGTACTTGGTATGCAAAATTCAGTGTCTTCTACTAGCAAAAATCAGACTACAAAGGCTGTTCTAGTTGCATCTTTATATCCAGAATATGGTGAGAATTTAAAGACAATGTATCTGAGAAAAGAAACTGTATCAGGGGAAGTAGTAGAGGTTTATCAAGCAAGTCATGAAGAGCATCAAAAGTTCAATGATGACATGCATAATATAAAGGCCTGGGTGGACATGTATCTACTGAGTTTATCTGATGTTTTGGTGACTACCTCTCGATCTACTTTTGGTTATGTTGCACAAGGTTTGGGAAATTTGAGGCCATGGCTTCTTCAAAGGCTCGCCGGTAACGAAAAACATTTTCCAACTTGCAAAAGGGACTTCTCAATGGAGCCTTGTAATCATTATCCTCCTAAGCATTTCTGCAATGGAAAGCCTATTGAAGATTTTGCATCTTCTTTCGGTTATTTGAGGAAATGCGAGGATTCTTCTTTTCAGGTGAAGCTGGTCAATGGTTCTGTGTAG 1899 0.3849 MEILQATLDKMEQSFKRFMTPFVVFFLAFPVLIVTLIMYRNSNSTLFEAVSESVELRAKTHNISNDELGSTGSNNTTNGGFLLGGRGRVHNISDQNIVGDGIVRHNSSVSEVRDQKIQNVTAATEGTVTANNNNLSSKVGSKNDSLNTSSTNDSAAHVEIPDVKDKLLHGLLASGFDEASCISRVQSQFYGKASPHRPSSYLVSKLRNYEKIHRKCGPNTRAYNRSIVKIVRSKNNGAVGTMCKYLVWTPANGLGNQMISIVATFLYAILTDKVLLLRFGKDKHGLFCEPFLNSTWILPQKSPFWNDNQVETYKSMLEKDKSYNTSKGHLPSSVFLNLAHTRDDPEKFFHCDHSQELLKKVPLLILLSDQYFVPSLFMTPIFSWEINKMFPEKDTLFHHLGRYLFHPSNEAWSLITGFYQKNLAKADERIGLQIRVFNHASTPKQSVMELILSCIIKNQLIPEVLGMQNSVSSTSKNQTTKAVLVASLYPEYGENLKTMYLRKETVSGEVVEVYQASHEEHQKFNDDMHNIKAWVDMYLLSLSDVLVTTSRSTFGYVAQGLGNLRPWLLQRLAGNEKHFPTCKRDFSMEPCNHYPPKHFCNGKPIEDFASSFGYLRKCEDSSFQVKLVNGSV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2217 632 MobiDBLite consensus disorder prediction 123 153 - -
Lja3g2217 632 Gene3D - 413 571 - -
Lja3g2217 632 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 631 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2217 632 Pfam Xyloglucan fucosyltransferase 160 600 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2217 632 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 15 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2217 Lja-Chr3 26377662 26380059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2217 165 628 Xyloglucan Fucosyltransferase1 AT2G03220 48.414 5.57e-150 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2217 K13681 - gmx:100809919 755.747