Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2216 ATGTACCAAAACTCAAGTTTTGCACTTTTTGAGGTGGTATCGAAAGTCCATGATGCAAAAACTCATAACGTTACAAATGAATTGGGAAATAGAGGGCTAAACAATACAACCAACAACGATTTCCCGTTAGGGGGAAGAGGAAGTGTTCATAATATATCAGATCAGAACATAGGAGATGGAATTGGAAGCCATAATAATACCGCTCCAAAAATGACACACTTGTTACAAGTTCAAAAAAATGATTCAACAGCGCGTATTGGAATCTCTGATGACAAAGAAAAATTGCTTCATGGATTGCTAGCTTCTGGATTTGATGAAGCATCATGCTTAAGCAGGGTACAATCCCAGTTTTACCGCAAAGCTTCTCCTCACATACCATCTCCATATTTGGTATCTAAATTAAGAAACTATGAAGAAATTCATATTAGGTGTGGACCTAATTCTAGAGCTTACAACATAAGCATGATTGAGATTGAAGGTTCTAAGAACAATATTGGTAGTGCTAGTACAATGTGTAAGTACCTTGTGTGGGCACCTGCCAATGGTTTAGGAAACCAAATGATTAGCATGGTTGCAACGTTTCTTTATGCTATCCTAACAGATAGAGTGTTGCTTGTCAAATTTGGGAAAGATAAGCATGGTTTGTTTTGTGAGCCATTTCTCAATTCAACTTGGATATTGCCTGAAGAGTCTCCATTTTGGAATGTGGGGAAATTACAAACATATCAAAGCATGATAGACAAGGACATGGCTAACAACACTTCAATTGAGAATTTACCATCAGTTTTGTTTCTTAATCTAAAACACACCCGCGATGATCCTGAGAAGTTTTTTCACTGTGATCATAGTCAAGATCTTCTCCGGAAGGTTCCTTTGTTGATTTTGAGGTCAGATCAGTATTTTATTAACAAAATGTTCCCAGAAAAGGACACAATTTTCCACCATTTAGGGCGCTACCTTTTCCACCCTTCAAATCAGGCATGGAGACTAATCAGCAGCCTCCAGATAAGAGTATTTAATCCTGTTTCCACTCCACAACAAGCAATTATGGATCTAGTTTTAAGTTGTACAAAACAGCATAAGCTACTACCAGAAGTAATGCAAAAATCAGTTTCTTCTACAATCAAAAACCAGACTACAAAGGTTGTTCTGGTGGCATCTTTATATCCAGAATATGGTGAGAATTTAAGGGCTATATATCTGAGAAAACCAACAGTAACAGGGGAAATTGTAGAGGTTTATCAGGCTAGTCACGAAGAGCATCAAAAGATTAATGATAACATGCATAATATGAAGGCTTGGGTAGACATGTATCTACTAAGTTTATCTGATGTGTTGGTCACTACCTCTCTATCAACTTTTGGATATGTTGCTCAGGGTTTGGGAAATTTGAGGCCTTGGCTTCTTTACAGGCTAGTCAATAATGAGACCCATTCTCCACCATGTGAACGGGACTTCTCAATGGAGCCTTGTTATCATATTCCTCCCAAGCATTACTGCAATGGAAAGCCCATAGAAGATTTTTCTTCTTTCCTTAAGTTGAGGAAGTGCAAGGATTACTATTTTGGTGTCAAGTTAGTCAATGGTTCTATTTAG 1596 0.3772 MYQNSSFALFEVVSKVHDAKTHNVTNELGNRGLNNTTNNDFPLGGRGSVHNISDQNIGDGIGSHNNTAPKMTHLLQVQKNDSTARIGISDDKEKLLHGLLASGFDEASCLSRVQSQFYRKASPHIPSPYLVSKLRNYEEIHIRCGPNSRAYNISMIEIEGSKNNIGSASTMCKYLVWAPANGLGNQMISMVATFLYAILTDRVLLVKFGKDKHGLFCEPFLNSTWILPEESPFWNVGKLQTYQSMIDKDMANNTSIENLPSVLFLNLKHTRDDPEKFFHCDHSQDLLRKVPLLILRSDQYFINKMFPEKDTIFHHLGRYLFHPSNQAWRLISSLQIRVFNPVSTPQQAIMDLVLSCTKQHKLLPEVMQKSVSSTIKNQTTKVVLVASLYPEYGENLRAIYLRKPTVTGEIVEVYQASHEEHQKINDNMHNMKAWVDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYRLVNNETHSPPCERDFSMEPCYHIPPKHYCNGKPIEDFSSFLKLRKCKDYYFGVKLVNGSI* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2216 531 Gene3D - 347 471 - -
Lja3g2216 531 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 530 - -
Lja3g2216 531 Gene3D - 169 223 - -
Lja3g2216 531 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 530 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g2216 531 Pfam Xyloglucan fucosyltransferase 88 500 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2216 Lja-Chr3 26347560 26349365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2216 91 527 Xyloglucan Fucosyltransferase1 AT2G03220 46.269 8.19e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2216 K13681 - gmx:100818288 679.093