Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0651 ATGAAGCCTTGGTCTCATCAAGATGAAAAAATAGAGGCTAATGGGATCAATGATCTGAAGAATCCATTGTTGCAGGCTCCACAAGATGAAACAGTTGGTACAGTTACACCTCAAATAAAAGATATCAAGGGTGCATCCTACTTAAGAATTCTTGAGTCCAAAGTTAGAAGCTTTAATGGGATAAACGGCATCATGGCGTCTCCAACTGATGAAAGAGCTGCAACCAATCATGTCCCAGATTTCATTGTTGCAAACAAAATAAAAGAAACCATAGAAGACACTTGTTTTGGAGTTGATGAGCTCAAGGGGCAAGACATATCAGAATGCCGAATCAAAATCAAGGGAATGACATGCACGAGTTGCTCTCAGTCTGTTGAGCATGCCCTTCAAATGATTGATGGAGTGAAAAAAGCAGTAGTAGGTCTAGCTTTAGAGGAAGCAAAAGTACTCTTCGATCCTAACCTCGTTGATACCAACAAAGTAATTGAAGCTATAGAAGATGCTGGATTTGAAGCAGATCTCATTAACTCCCGAAATGACGATATGAACAAAGTGCATCTGAAACTTGAAGGAGTAGATAGTCCAGAAGATGTAAATGTCATAATTTCTTCACTTAATTCAACTGTGGGTGTGAATCATGTTGACATGGATTTGACAGAACATAAAGTTACTATTAACTATGATCCAGACCTTACAGGTCCAAGATCTCTTATACATTGCATCAAGGAAGCTAGCAATTTCCCTAATGTGTATCAAGCAACATTGTATACTCCTTCAGGAAAGAGAGAAATGGACAAGGTGAATGAAATTCGGATGTACCGGAACCAAGTATCGTTCAGCTGCTTATTTTCTGTTCCTGTGTTCATACTTTCCATGGTTCTTCCCATGCTTCCTCCATACGGCAACTGGTTAAACTATAAGATTCACAATATGCTCACTCTTGGGTTGTTCTTAAGATGGATCCTCAGCACACCGGTTCAGTTCATTGTTGGCAAAAGGTTCTATGTAGGATCATATCATGCTCTAAGGAGAAGGTCTGCTAACATGGATGTGCTGGTTGCACTTGGAACTAGTGCTGCTTATTTTTACTCACTATACATTGTAATAAAAGCTCTGGCTTCAGCTACATTTCAGGGACAAGATTTCTTCGACACCAGTTCTATGCTTATATCATTTATTCTACTAGGGAAATATTTGGAGATTGTGGCTAAAGGTAAAACCTCAGCGGCTTTAGAAAAGCTCACACAACTTGTTCCTGATAAGGCTTATTTGTTAGCCATTGACACTGATGGAAATGTTCTCACGGAGAGAGAAATTGACACTGAACTCATACAAAAGAATGACATGATCAAGATTGTTCCGGGTGCCAAAATTCCTGTTGATGGTGTTGTAATGAAAGGGAAAAGCTATGCAAATGAAAGCATGATCACTGGGGAAGCAAAACCAGTTAATAAAAGTCCAGGAGACAAGGTTATCGGAGGGACCATCAATGAGAATGGCTGCTTACTGGTGAAGGCCACTCATGTTGGATCAGATACTGCACTTTCTCAAATTGTTCAACTAGTAGAAGCTGCTCAACTTGCTAGAGCACCAGTTCAAAAACTTGCTGATCATATTTCAAGGGTTTTTGTTCCAATAGTGGTTGTTGCATCATTCATAACTTGGCTGGGATGGTTTATTCCTGGAGAAGCTGGTTTTTACCCAAAATCTTGGATACCAGAAGCTATGGATGCATTTGAGTTTGCTCTGCAGTTTGCTATATCTGTGCTAGTTGTTGCCTGTCCATGTGCTTTAGGTCTTGCCACACCAACAGCAATCATGGTTGCTTCAGGAGTTGGTGCTTCTCAAGGTGTGCTCATCAAGGGTGGGGATGCAATGGAAAAGGCACACAAGGTAAAAGTTGTTGTCTTTGATAAGACAGGGACACTGACAATTGGGAAGCCAGTGGTCGTTAGAGCAGTTTTGTTTTCCAAAATTTCTATGGAGGAGTTATGTGACATGGCAATTGCTGTGGAGGCAAATAGTGAACATCCTATAGCAAAAGCTATTGTAGCACACGTTAAGAGGCTGCGCCGGAAATTCGGAGCCTGCGTTGAGCAAGTCCTAGAGGTGAAGGATTTTGAGGTACACTTGGGGGCAGGAGTAAGTGCAAAAGCTAATGAGAAAACAGTTTTGGTTGGAAACAAGAGACTCATGCATGCTTGTAATGTCCCAATAAGTCTTGAGGTTGAGAGGTTCATTTCTGAGAATGAAGTTCTGGCAAGAACATGTGTGTTAGTTTCAATTGAGGGAAAGATTTCAGGAGGATTCTCTGTAACTGATCCTGTAAAGCCAGAGGCACAGCGTGTTGTATCTTTTCTCCACTCCATGAACATCTCAACCATGATAGTGACTGGCGATAACTGGGCCACTGCAAATGCTGTTGCAAATGAAGTTGGTATTGATAAGGTCTTTGCTGAGACTGATCCTCCTGGAAAAGCTGACATAGTGAAAGACTTGCAGATGAAAGGAATGAGTGTGGCAATGGTGGGGGATGGAATAAATGATTCCCCATCCTTAGCTGCTGCTGATGTTGGCATGGCTATTGGTGCTGGAACTGACATAGCAATAGAAGCAGCTGATATAGTTCTTGTTAAAAGCAGCTTGGAAGATGTGATTACAGCAATAGATCTTTCTAGAAAGACCATGTCTCGCATCTGGCTCAACTATTTCTGGGCTTTTGGTTACAACATTCTAGGCCTGCCCATTGCAGCTGGTGTCTTGTACCCCTTTTTAAGAATCAGGTTGCCTCCATGGCTTGCTGGTGCTTGCATGGCTGCTTCATCACTTAGTGTGGTTTCTTCATCCCTCTTGCTTATGTTGTATAAAAAACCTTTGCATGCGGATACTAAGTGA 2895 0.4155 MKPWSHQDEKIEANGINDLKNPLLQAPQDETVGTVTPQIKDIKGASYLRILESKVRSFNGINGIMASPTDERAATNHVPDFIVANKIKETIEDTCFGVDELKGQDISECRIKIKGMTCTSCSQSVEHALQMIDGVKKAVVGLALEEAKVLFDPNLVDTNKVIEAIEDAGFEADLINSRNDDMNKVHLKLEGVDSPEDVNVIISSLNSTVGVNHVDMDLTEHKVTINYDPDLTGPRSLIHCIKEASNFPNVYQATLYTPSGKREMDKVNEIRMYRNQVSFSCLFSVPVFILSMVLPMLPPYGNWLNYKIHNMLTLGLFLRWILSTPVQFIVGKRFYVGSYHALRRRSANMDVLVALGTSAAYFYSLYIVIKALASATFQGQDFFDTSSMLISFILLGKYLEIVAKGKTSAALEKLTQLVPDKAYLLAIDTDGNVLTEREIDTELIQKNDMIKIVPGAKIPVDGVVMKGKSYANESMITGEAKPVNKSPGDKVIGGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLARAPVQKLADHISRVFVPIVVVASFITWLGWFIPGEAGFYPKSWIPEAMDAFEFALQFAISVLVVACPCALGLATPTAIMVASGVGASQGVLIKGGDAMEKAHKVKVVVFDKTGTLTIGKPVVVRAVLFSKISMEELCDMAIAVEANSEHPIAKAIVAHVKRLRRKFGACVEQVLEVKDFEVHLGAGVSAKANEKTVLVGNKRLMHACNVPISLEVERFISENEVLARTCVLVSIEGKISGGFSVTDPVKPEAQRVVSFLHSMNISTMIVTGDNWATANAVANEVGIDKVFAETDPPGKADIVKDLQMKGMSVAMVGDGINDSPSLAAADVGMAIGAGTDIAIEAADIVLVKSSLEDVITAIDLSRKTMSRIWLNYFWAFGYNILGLPIAAGVLYPFLRIRLPPWLAGACMAASSLSVVSSSLLLMLYKKPLHADTK* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0651 964 Pfam haloacid dehalogenase-like hydrolase 632 857 - -
Lja3g0651 964 CDD HMA 111 172 IPR006121 GO:0046872
Lja3g0651 964 Gene3D - 721 774 IPR023299 GO:0000166
Lja3g0651 964 Gene3D - 643 720 IPR023299 GO:0000166
Lja3g0651 964 PRINTS H+-transporting ATPase (proton pump) signature 815 831 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0651 964 PRINTS H+-transporting ATPase (proton pump) signature 874 899 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0651 964 PRINTS H+-transporting ATPase (proton pump) signature 843 859 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0651 964 SFLD C1.7: P-type atpase like 618 895 - -
Lja3g0651 964 ProSiteProfiles Heavy-metal-associated domain profile. 184 250 IPR006121 GO:0046872
Lja3g0651 964 PANTHER ATP7, ISOFORM B 27 961 - -
Lja3g0651 964 PRINTS P-type cation-transporting ATPase superfamily signature 866 878 - -
Lja3g0651 964 PRINTS P-type cation-transporting ATPase superfamily signature 636 650 - -
Lja3g0651 964 PRINTS P-type cation-transporting ATPase superfamily signature 472 486 - -
Lja3g0651 964 PRINTS P-type cation-transporting ATPase superfamily signature 790 800 - -
Lja3g0651 964 PRINTS P-type cation-transporting ATPase superfamily signature 843 862 - -
Lja3g0651 964 PRINTS P-type cation-transporting ATPase superfamily signature 768 779 - -
Lja3g0651 964 CDD P-type_ATPase_Cu-like 279 939 - -
Lja3g0651 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 389 920 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g0651 964 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 349 952 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lja3g0651 964 ProSiteProfiles Heavy-metal-associated domain profile. 108 174 IPR006121 GO:0046872
Lja3g0651 964 Pfam Heavy-metal-associated domain 111 171 IPR006121 GO:0046872
Lja3g0651 964 Gene3D - 603 899 IPR023214 -
Lja3g0651 964 ProSitePatterns Heavy-metal-associated domain. 113 142 IPR017969 GO:0046872
Lja3g0651 964 Gene3D - 106 177 - -
Lja3g0651 964 SUPERFAMILY Calcium ATPase, transduction domain A 436 522 IPR008250 -
Lja3g0651 964 SFLD p-type atpase 618 895 IPR044492 -
Lja3g0651 964 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 27 961 - -
Lja3g0651 964 SUPERFAMILY HMA, heavy metal-associated domain 179 244 IPR036163 GO:0046872
Lja3g0651 964 SUPERFAMILY HAD-like 634 949 IPR036412 -
Lja3g0651 964 ProSitePatterns E1-E2 ATPases phosphorylation site. 638 644 IPR018303 -
Lja3g0651 964 SUPERFAMILY HMA, heavy metal-associated domain 104 177 IPR036163 GO:0046872
Lja3g0651 964 Pfam E1-E2 ATPase 430 614 - -
Lja3g0651 964 SUPERFAMILY Calcium ATPase, transmembrane domain M 381 628 IPR023298 -
Lja3g0651 964 Gene3D - 404 526 - -
Lja3g0651 964 Gene3D - 178 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0651 Lja-Chr3 6482987 6487613 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0651 51 962 Primary Pumps ATPases AT1G63440 55.495 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0651 K17686 - gmx:100793894 1474.53