Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3234 ATGGAGGGTCTTCCTCAAGGTTACCGCCCCAACGTTGGTGTCTGTCTCATCAACTCTAATGATCAGATTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGGAGGAATTGAAGATGGTGAAGATCCCAAATCTGCTGCCATTCGGGAACTTCGAGAAGAAACTGGGATAGTATCTGCTGAGATAATTGCTGAGGTTCAGAATTGGTTGACATATGACTTCCCTCCTGCTGTGAAGGCTAAAGTAAATCGTCTGTGGGGAGGTGAATGGCATGGACAAGCACAAAAGTGGTTTCTCATGAGATTTACAAAAGATGACAACGAGGTCAACTTAGCAAATGGTGAAGCAGAAACAGAATTTGCAGAGTGGAAATGGACAGACCCTGAAGAAGTTATTGAGCAGGCAGTGGACTACAAGAGACCAACATATGAAGAGGTGATAAGAACCTTCAAGCCTTACCTTCAAGGGAATTCAATATCTGCCAAATGTAAATCTACTAAGTGGTGA 522 0.4368 MEGLPQGYRPNVGVCLINSNDQIFVASRLNVPGAWQMPQGGIEDGEDPKSAAIRELREETGIVSAEIIAEVQNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRFTKDDNEVNLANGEAETEFAEWKWTDPEEVIEQAVDYKRPTYEEVIRTFKPYLQGNSISAKCKSTKW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3234 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 159 - -
Lja2g3234 173 Hamap RNA pyrophosphohydrolase [rppH]. 2 160 IPR022927 -
Lja2g3234 173 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
Lja2g3234 173 SUPERFAMILY Nudix 7 158 IPR015797 -
Lja2g3234 173 CDD Ap4A_hydrolase_plant_like 7 155 IPR022927 -
Lja2g3234 173 ProSiteProfiles Nudix hydrolase domain profile. 7 153 IPR000086 -
Lja2g3234 173 Pfam NUDIX domain 8 150 IPR000086 -
Lja2g3234 173 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Lja2g3234 173 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Lja2g3234 173 PANTHER BNACNNG74470D PROTEIN 1 173 - -
Lja2g3234 173 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3234 Lja-Chr2 71119831 71126295 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3234 2 71119831 71126295 Lja2g3234 2 71119831 71126295 ECH