Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3225 ATGATTACTTGGAAAGATCTATACACTGTCCTAACAGCTGTTGTCCCTTTATATGTAGCCATGATCTTAGCATATGGTTCTGTCCGTTGGTGGAAGATATTCTCACCGGACCAATGTTCCGGCATAAACCGTTTCGTGGCCGTATTCGCGGTTCCACTCCTTTCCTTCCATTTCATTTCCACCAACAACCCTTACGAAATGAACTTCAGGTTCATCGCTGCAGATACACTTCAGAAAATAATCATGCTCTTTGCCTTGTTTCTGTGGACAAATTTCACCAAAAATGGTAGCCTTGAATGGATGATCACCATCTTCTCTCTTACCACTCTGCCCAACACCCTCGTCATGGGGATCCCCTTGTTAATCGCTATGTACGGCGATTACTCGGGCACCCTCATGGTCCAAGTGGTTGTACTCCAATGCATCATATGGTACACCCTCCTCTTATTCCTCTTTGAGTACCGCGGTGCAAAGCTGCTCATCATGGAGCAGTTTCCTGAAACCGCAGCCTCAATTGTGTCATTCAAGGTTGACTCCGACGTGGTTTCTCTTGACGGTCGAGACTTTCTTGAGACTGATGCGGAGATCCGAGAGGATGGGAAGCTCCGCATCGTCGTGAGAAAGTCCAACGCGTCAAAGAGGTCATTCATGATGACCACTCCTCGACCATCGAACCTTACTGGAGCTGAGATTTACAGTCTAAGCTCCACTCCGCGAGGCTCCAACTTTAACCATGGGGAATTTTTCTCCATGATGGGTTATCAGCCCAGGCATTCTAATTTCGGACCCAATGATATGTACTCTGTTCAATCCTCTCGTGGTCCTACTCCAAGACCCTCCAATTTTGAAGAAAATTGTACTGGAGTTACTGGAAGTTCCCCCCGATTCGGGTTTTACCCGCAACCCAACCCGGAATTCTCCACCACCACTACAACCAACACAAAAGCTTTGATAAGCCAGAACCAGAATTTGCAGCAACAGCAACAACATCAGGCCGTTCCATTAGCAAACAAGGCTGCAAATGATGCTAAGGAGCTGCACATGTTTGTGTGGAGCTCAAGCGCGTCTCCGATTTCGGAAAGTGCTGGCCTCAACACATTTGGAACCTCCCAGCAACCGGATCAGGAGGCTAAAGAGATCAGGATGATGGTGGCTGATGAGCACAGTAATAATCAAAGTAGGGAACCCACCAACAAAGAACTTGGTGGGGAAGAGTTCAAGTTCAGTGGAAAGGTGGGAGAAAAAGTAGTGGAGGAAGAGAGAGAGAAAGAGGGGCCCAATGGTCTCAACAAGCTTGGCCCGAGGTCCGCCACAGAGCTCCACCCTAAGGCTGCTGGAGCCGCCGAGTCTGGCACCGGGAAACACATGCCTCCGGCGAGTGTGATGACCCGTCTCATTCTTATCATGGTGTGGAGGAAGCTTATCCGCAATCCCAACACATACTCTAGCCTCATTGGTCTCATTTGGTCCCTCATTGCCTTTAGGTGGGATGTGCATATGCCCAAAATAATAGAGAAATCAATTTCCATACTGTCTGATGCTGGTCTTGGCATGGCTATGTTCAGTTTAGGTCTTTTTATGGCTCTTCAACCCAAGATAATTGCATGTGGGAACTCTGTAGCCACATTTGCCATGGCTATTAGATTCCTTACAGGTCCAGCAGTAATGGCAGCAGCTTCCATCGCTGTTGGCCTACGTGGTACCCTTCTACATGTAGCTATTGTTCAGGCTGCACTTCCACAAGGGATTGTTCCATTTGTGTTTGCCAAGGAGTACAATGTCCATCCAGCAATTCTTAGTACAGCGGTTATATTTGGGATGCTAATTGCACTTCCAATTACTCTAGTCTACTACATACTCCTTGGGTTGTAA 1872 0.4765 MITWKDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAVFAVPLLSFHFISTNNPYEMNFRFIAADTLQKIIMLFALFLWTNFTKNGSLEWMITIFSLTTLPNTLVMGIPLLIAMYGDYSGTLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEIREDGKLRIVVRKSNASKRSFMMTTPRPSNLTGAEIYSLSSTPRGSNFNHGEFFSMMGYQPRHSNFGPNDMYSVQSSRGPTPRPSNFEENCTGVTGSSPRFGFYPQPNPEFSTTTTTNTKALISQNQNLQQQQQHQAVPLANKAANDAKELHMFVWSSSASPISESAGLNTFGTSQQPDQEAKEIRMMVADEHSNNQSREPTNKELGGEEFKFSGKVGEKVVEEEREKEGPNGLNKLGPRSATELHPKAAGAAESGTGKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLIAFRWDVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAIRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3225 623 Pfam Membrane transport protein 9 618 IPR004776 GO:0016021|GO:0055085
Lja2g3225 623 MobiDBLite consensus disorder prediction 417 456 - -
Lja2g3225 623 TIGRFAM 2a69: auxin efflux carrier 1 623 IPR014024 -
Lja2g3225 623 PANTHER AUXIN EFFLUX CARRIER-RELATED 1 623 - -
Lja2g3225 623 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3225 Lja-Chr2 70892805 70898071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3225 1 623 Organic Solute Cotransporters AT1G70940 74.303 0.0 936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3225 2 70892805 70898071 Lja2g3225 2 70892805 70898071 ECH