Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3220 ATGAGCTACACACAAAGGTGCTTGCCGCAATTTTTACACATCAGAGACCGCAGCGCACTGTTACCACCTCCACTCAGCCTCTCGCTTAAACACCAAGGGCAATCAAAACACAGGAGGGTTGTTAAAATGTCTGCAGCTGAACTCACTAACTCTAGGATCTCATATGAGTCCTTTGCAATAAAGCCTCCCGTACACCCTACTTACGATTTAAAAGGCATTATCAAGTTAGCCCTTGCAGAAGATGCCGGTGATCGAGGTGATGTAACATGCATGGCTACCATTCCATTTGACATGGAAGTTGAAGCTTATTTCTTGGCGAAGGAGGATGGCATCATTGCTGGAATTGCACTTGCTGATATGATATTTCATGAGGTTGATACTTCTTTGAAGGTGGAGTGGTCTAAAAATGATGGAGATTTTATCCACAAGGGGCTACAATTTGGAAAAGTTCGAGGGCGGGCACACAACATTATCGTAGCTGAAAGGGTAGTGCTAAACTTTATGCAGAGGATGAGTGGGATTGCAACTTTAACTAAGGCAATGGCAGATGCAGCATCCCCTGCATATATTTTGGAGACTAGAAAAACTGCTCCAGGTTTACGTTTATTGGATAAGTGGGCGGTATTAATTGGTGGAGGTCGGAATCATAGGATGGGTTTGTTTGACATGGTGATGATAAAAGATAATCACATATCAGCAGCTGGAGGTGTTACAAATGCCCTGAAAACTGTTGATCTGTATCTAGAGCAAAAAAACCTTAAAATGGAAGTTGAGGTTGAGACCAGGACTCTTGAGGAAGTGGAAGAAGTATTAGGTTATGCATCTCAAACAAAGACTTCTTTAACTCGAATAATGTTGGATAATATGGTTGTACCTCTAACAAACGGAGATGTGGACATATCTATGCTGAAAGAAGCTGTACGGTTGGTCAATGGGAGATTTGAAACTGAGGCATCAGGCAATGTTACTCTAGAGACTGTACACGAAATTGGTCAAAGTGGAGTTACCTTCATCTCGAGTGGTTCCTTGACGCATTCTGTAAAAGCACTTGACATCTCCCTAAAAATTGACACCGAATTGGCACTTAAAGTTGGAAGGCGCACTGGACGTGCTTGA 1116 0.4265 MSYTQRCLPQFLHIRDRSALLPPPLSLSLKHQGQSKHRRVVKMSAAELTNSRISYESFAIKPPVHPTYDLKGIIKLALAEDAGDRGDVTCMATIPFDMEVEAYFLAKEDGIIAGIALADMIFHEVDTSLKVEWSKNDGDFIHKGLQFGKVRGRAHNIIVAERVVLNFMQRMSGIATLTKAMADAASPAYILETRKTAPGLRLLDKWAVLIGGGRNHRMGLFDMVMIKDNHISAAGGVTNALKTVDLYLEQKNLKMEVEVETRTLEEVEEVLGYASQTKTSLTRIMLDNMVVPLTNGDVDISMLKEAVRLVNGRFETEASGNVTLETVHEIGQSGVTFISSGSLTHSVKALDISLKIDTELALKVGRRTGRA* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3220 371 Coils Coil 250 270 - -
Lja2g3220 371 TIGRFAM nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 74 356 IPR004393 GO:0004514|GO:0009435
Lja2g3220 371 Gene3D - 77 354 IPR037128 GO:0016763
Lja2g3220 371 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 60 364 - -
Lja2g3220 371 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 60 364 IPR027277 -
Lja2g3220 371 SUPERFAMILY Nicotinate/Quinolinate PRTase C-terminal domain-like 174 356 IPR036068 GO:0009435
Lja2g3220 371 Pfam Quinolinate phosphoribosyl transferase, C-terminal domain 174 355 IPR002638 GO:0004514|GO:0009435
Lja2g3220 371 Gene3D Aldolase class I 186 346 IPR013785 -
Lja2g3220 371 SUPERFAMILY Nicotinate/Quinolinate PRTase N-terminal domain-like 65 173 - -
Lja2g3220 371 Pfam Quinolinate phosphoribosyl transferase, N-terminal domain 84 172 IPR022412 GO:0016763
Lja2g3220 371 CDD QPRTase 73 355 IPR004393 GO:0004514|GO:0009435
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3220 2 69871368 69894946 Lja2g3220 2 69871368 69894946 ECH