Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g3212 ATGGGTGCTGAGAAGAAATGGCTCTTCACCCTATTCACTGCAGCATTTCTCTCCCTCATCATTCTCATGCTCACTTCCTTCTCTTGCTTCACCTCCCCCAAGCCTTTCCCTTCTCTTGTCCAGCAAGGAGCTCACTATCCCCCTGCATTTGCCTACTTCATAGCTGGTGGGAACAGAGACAAGAACAGGATATTTAGGTTGTTGCTGGCTATCTATCATCCGAGGAACCGTTACCTGCTTCACCTTGGAATGGATGCTAGGGATGAAGAGAGGCATGAGCTGGCTGCTGCAGTTATGTCGGTGCCGGCAATTCGGGCTTTTGGAAATGTTGATGTGGTGGGGAAGGCTGATTATGTGACCTACTTGGGGTCCTCCAATGTTGCCATCACTCTGAGGGCTGCTGCTATCATGATGAAATTGGATGGTGGATGGAATTGGTTTGTCACATTAAGCGCGCGAGATTATCCCCTCATCACCCAGGATGATCTGTCCCATGTTTTTTCTTCTGTTCGGAGGGACCTCAATTTCATTGATCACACCAGTGACCTTGGATGGAAGGAAAGTGATAGATTCCAGCCTATTGTAGTTGATCCAGCAATATATTTAGCTAGGAGAAGTCAGATTTTCCAAGCTACACAGAAGCGGGAGACACCTGATGCATTCAAAATCTTCACAGGTTCTCCATGGGTCATCTTGAGTCGATCCTTCCTCGAGTTCTGCATTTTCGGCTCGGACAATCTACCTCGATCGCTCCTGATGTATTTTACAAATGTTAAGTTATCCCAAGAAGGTTATTTTCACTCAGTCATTTGCAACGCACCAGAATTCAAGAACACAACGGTCAACGGTGACTTGCGGTATATGATCTGGGACAATCCTCCGAAGATGGAACCACACTCCCTAAATGTATCTGTTTACAATCAGATGGTAGAAAGTGGGGCTGCTTTTGCTAGACAGTTTGATGTTGATGACCCTGTACTGGACATGATTGATGCGAAGATCCTCCGGCGCGGGCGTAATCGAGCTGTGCCGGGAGCGTGGTGCTCTGGCCGGAGGAGCTGGTGGGTAGATCCATGTTCCCAGTGGAATGACGTCAATATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGAGTCTGTTTCAAGTCTTCTTGATGACTGGAGCTCACAGATCAATCAATGTCAGAATTCAAGTGAAGAGACACAAGAGTAG 1215 0.4757 MGAEKKWLFTLFTAAFLSLIILMLTSFSCFTSPKPFPSLVQQGAHYPPAFAYFIAGGNRDKNRIFRLLLAIYHPRNRYLLHLGMDARDEERHELAAAVMSVPAIRAFGNVDVVGKADYVTYLGSSNVAITLRAAAIMMKLDGGWNWFVTLSARDYPLITQDDLSHVFSSVRRDLNFIDHTSDLGWKESDRFQPIVVDPAIYLARRSQIFQATQKRETPDAFKIFTGSPWVILSRSFLEFCIFGSDNLPRSLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVDPCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQNSSEETQE* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g3212 404 Pfam Core-2/I-Branching enzyme 50 309 IPR003406 GO:0016020|GO:0016757
Lja2g3212 404 PANTHER OS01G0121800 PROTEIN 2 396 - -
Lja2g3212 404 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lja2g3212 404 PANTHER GLYCOSYLTRANSFERASE 2 396 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g3212 Lja-Chr2 69561106 69570049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g3212 1 396 Glycosyltransferase AT1G71070 69.444 0.0 578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g3212 2 69561106 69570049 Lja2g3212 2 69561106 69570049 ECH