Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2270 ATGGATGGTGATAATGGTCTTAACATCCGAAATTGGGGTTACTATGAACCCGCAACGTCCTTTAAGAGCCATCTGGGGCTGCAGCTGATGTCCACCATGCCCGAAAAACCTATGTTCGGCGGTCGCAATGCTGCGGTTTTATCCGGCGCTAATGGGGCATTTCACAATCACCACCATAGGGACATTGGGATGCCCCAAGCTGCTACATACCCTATGGAGTACATGAGGGATGCATGGATTAGTAGTCAGAGAGACAAGTATATGCATATGATACCTACAAACCCGAGTTTTGGTGGTATTCCGGAGACATCTACAGCGCACCATATACAAATGATTCCACCACCTGAGTTGACAAAGGAAGAAAGCCCAATTGATGAGGCAGTAGCCCCTGTTGCTGAGAAGGTGAAGGGTACTGGTAAGAAGAGGCAGGGACCAAAGTTGCCCAAATCCCCCAAAGCAAAGAAGCCAAAGAGGGGCCCTCACCTTCCTAAGGATGAGAATGCTGCTTCAGTTCAACGGGCAAGGGTTCCAAAGAAGACTGCTGAAATTGTTATAAACGGGATTGATATGGATATTTCAAGCATTCCAATTCCTGTTTGTTCATGCACCGGGGCTCCTCAACAGTGTTACAGATGGGGTTCTGGTGGGTGGCAGTCAGCATGCTGCAGAACTGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGCGCTAGGATAGCTGGGAGGAAAATGAGTATAGGAGCATTTAAGAAGGTTTTAGAGAAACTTGCCGCCGAGGGTTATAACTTTTCCAATCCAATTGATTTGAAGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACCATCAGAAATGAATAA 873 0.4708 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSTMPEKPMFGGRNAAVLSGANGAFHNHHHRDIGMPQAATYPMEYMRDAWISSQRDKYMHMIPTNPSFGGIPETSTAHHIQMIPPPELTKEESPIDEAVAPVAEKVKGTGKKRQGPKLPKSPKAKKPKRGPHLPKDENAASVQRARVPKKTAEIVINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCRTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIRNE* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2270 290 MobiDBLite consensus disorder prediction 141 158 - -
Lja2g2270 290 MobiDBLite consensus disorder prediction 133 176 - -
Lja2g2270 290 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 288 - -
Lja2g2270 290 Pfam GAGA binding protein-like family 1 288 IPR010409 -
Lja2g2270 290 SMART GAGA_bind_2 1 288 IPR010409 -
Lja2g2270 290 PANTHER - 1 288 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2270 Lja-Chr2 26357896 26360572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2270 1 288 BBR or BPC Transcription factor family AT2G01930 50.987 1.54e-94 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lja2g2270 GAGA_bind 9.3e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2270 - - gmx:100784091 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2270 2 26357896 26360572 Lja2g2270 2 26357896 26360572 ECH