Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2191 ATGGAAGATTCAACACCAAAGTCTCTGATGGAGAACCTGCTAGGCCTTCTCAGGGTTCGTGTTAAGCGTGGCGTCAACCTTGCTGTTCGTGATGTTCGTAGCAGTGACCCTTATGTTGTTGTTAAGATGTACAATCAGAAACTTAAGACTCGTGTGATTAAGAAGGATGTTAATCCTGAGTGGAATGAAGACCTTACCCTTTCTGTCATAGATCCTCATCACTCCGTTTTGCTGACTGTGTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCGGAATTTGAAATCTTTCCCTATATAGAAGCCTTGAAGATGAACGTAACTGGCCTTCCCAACGGCACCGTGATCAAGAGAATACAACCAAGCAAGGAGAATTGCTTGGCGGACGAGAGCTGTATCTATTATAACAGCGGCAAAATTATCCAAGACATGATCCTCAGATTGCGACATGTCGAATGTGGTGAAGTGGAAATCTCGTTGCACTGGATTGATCTTCCCGGTTCTAAGGGTTTATGA 525 0.4362 MEDSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVVKMYNQKLKTRVIKKDVNPEWNEDLTLSVIDPHHSVLLTVYDHDTFSKDDKMGDAEFEIFPYIEALKMNVTGLPNGTVIKRIQPSKENCLADESCIYYNSGKIIQDMILRLRHVECGEVEISLHWIDLPGSKGL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2191 174 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 6 173 - -
Lja2g2191 174 CDD C2_ArfGAP 14 157 - -
Lja2g2191 174 Gene3D C2 domain 11 172 IPR035892 -
Lja2g2191 174 ProSiteProfiles C2 domain profile. 1 115 IPR000008 -
Lja2g2191 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 173 IPR044562 -
Lja2g2191 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 100 IPR035892 -
Lja2g2191 174 Pfam C2 domain 15 99 IPR000008 -
Lja2g2191 174 SMART C2_3c 16 111 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2191 Lja-Chr2 24937981 24940951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2191 47 174 C2H2 Transcription Factor Family AT1G70790 57.692 6.06e-51 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1832 2 18873172 18875989 Lja2g2191 2 24937981 24940951 ECH
Lja2g3238 2 71516425 71519276 Lja2g2191 2 24937981 24940951 ECH
Lja2g2191 2 24937981 24940951 Lja2g2191 2 24937981 24940951 ECH
Lja4g0016 4 142759 148340 Lja2g2191 2 24937981 24940951 PCT