Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1478 ATGGGAAGAAGCAGTAGAAGAGTTCAATTCCCAGAAGAAGATGGAGATCCCTATCTTCCTCTCTGCCCCAGAGACACCACCTCCACATCACAATCACACGGTTCCTCCCAAGACCTGCGTCTGAATCAACTCGGTTACAAGCAAGAACTTCGCCGCAACTTATCGGCAATAGCGAACTTCTCGATGACCTTTTCGATTGTGTCAATAATGACCGGGCTGACGACGTTGTACGGGACGGGGCTGAGATTCGGAGGGCCGGCGAGCATGGTGTACGGGTGGTGGGTGGTTGGTGCTCTCACAATGGCGGTGGGTCTGTCCATGGCTGAGATCTGTTCGGCGTACCCGACCTCCGGCGGGCTTTACTTTTGGAGCGCCAGGTTGTGCCGCTCTCACTCCGCGGCTCCCTTCGCTGCTTGGCTCACTGGCTGGTTCAATATTGTTGGTCAGTGGGCAGTGACAACAAGTATAGATTATTCCCTTGCACAACTGATTCAAGTTATCATTCTCCTTAGCACTGGTGGGAAAAATGGTGGTGGATATGAGGCTTCTAAATATGTAGTTATTGCTTTCCATGGTGGAATTTTGCTCTTACATGGCATAATAAACAGCCTCCCTATCTCATTATTATCATTCTTAGGACAGCTAGCTGCTATATGGAACGTTCTAGGTGTTCTTGTGCTTATGATTCTCATTCCATCTGTTGCAACGGAAAGGGCTAGTGTGAAGTTTGTTTTCACTTATTTCAATACTGATAATGGTGATGGAATCAACAGCAGATGCTATATTTTTCTGCTTGGACTTTTAATGAGTCAATATACCCTGACTGGGTATGATGCATCAGCTCATATGACAGAGGAAACGAAGGATGCTGAGAGAAATGGACCAAAAGGAATTATTAGTTCTATTGGGTTATCTATTATTGTTGGATGGTGTTACATACTAGGCATTTCCTTTGCAGTTACTGATATCCCTGGCCTTTTAAGTGATGATAATGAGGCTGGTGGGTATGCAATTGCTGTGAGATATTTTATCTGGCATTCAAGAGTAGATATGGCAATGGAGTTGGTGGTATTGTTTGCTTGGGAATCGTTGCTAATGACTTATGCTTTCTCTAGAGATGGGGCCATGCCATTATCTTCATTGTGGCATAAAGTTAACAAACAGGAGGTCCCCATATATGCAGTTTGGCTTTCCACTGTTATTTCATTTTGCATGGCACTAACGTCTCTTGGAAGCACAGTGGCGTTTGATGCCATGGTGTCCATAGCAACAATAGGCCTCTACATTGCTTATGCACTACCAATCTTCTTCAGGGTGACTCTGGCACGCAAGTCTTTTGCCCCGGGACCCTTCAACTTGGGTCGTTACGGGACCTTTGTTGGTTGGATTTCAGTTATTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCCTACCCAATAACCATTGAGACGTTTAACTACACCCCTGTAGCTGTTGGATGTTTGCTACTGCTTGTTATTTCTTACTGGATATTCAGTGGCCGGCATTGGTTTCAAGGCCCTATAACCAATATAGATATATGA 1572 0.4536 MGRSSRRVQFPEEDGDPYLPLCPRDTTSTSQSHGSSQDLRLNQLGYKQELRRNLSAIANFSMTFSIVSIMTGLTTLYGTGLRFGGPASMVYGWWVVGALTMAVGLSMAEICSAYPTSGGLYFWSARLCRSHSAAPFAAWLTGWFNIVGQWAVTTSIDYSLAQLIQVIILLSTGGKNGGGYEASKYVVIAFHGGILLLHGIINSLPISLLSFLGQLAAIWNVLGVLVLMILIPSVATERASVKFVFTYFNTDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEETKDAERNGPKGIISSIGLSIIVGWCYILGISFAVTDIPGLLSDDNEAGGYAIAVRYFIWHSRVDMAMELVVLFAWESLLMTYAFSRDGAMPLSSLWHKVNKQEVPIYAVWLSTVISFCMALTSLGSTVAFDAMVSIATIGLYIAYALPIFFRVTLARKSFAPGPFNLGRYGTFVGWISVIWVVTISILFSLPVSYPITIETFNYTPVAVGCLLLLVISYWIFSGRHWFQGPITNIDI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1478 523 ProSitePatterns Amino acid permeases signature. 84 115 IPR004840 GO:0006865|GO:0016021|GO:0055085
Lja2g1478 523 PANTHER AMINO-ACID PERMEASE BAT1 34 522 - -
Lja2g1478 523 MobiDBLite consensus disorder prediction 23 37 - -
Lja2g1478 523 PIRSF AA_transporter 35 517 - -
Lja2g1478 523 MobiDBLite consensus disorder prediction 1 37 - -
Lja2g1478 523 Pfam Amino acid permease 58 495 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lja2g1478 523 PANTHER - 34 522 - -
Lja2g1478 523 Gene3D Amino acid/polyamine transporter I 50 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1478 Lja-Chr2 14277132 14283234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1478 101 521 Organic Solute Cotransporters AT2G01170 69.495 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1478 2 14277132 14283234 Lja2g1478 2 14277132 14283234 ECH