Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1477 ATGCCAGAAACTCAGTTGGGCACACATACCATTAGATCACATGGAGCTAAAGTGGCAAGAGTACATATGAGTGACTGGTTGATTCTTTTACTCCTTGTGATCATAGATGTCGTCTTGAATGTGATAGAGCCATTTCACCGTTTTGTTGGAGAGGGGATGTTAACCGACTTGAGATACCCATTGCAAGACAATACTATACCCTTTTGGGCTGTTCCAATAATTGCAATATTGTTGCCAATGGCTATCATTGTGGTTTACTATTTCATCCGTAAGGATGTTTATGACTTCCACCATGCTATATTGGGCCTTCTATTTTCTATACTCATTACTGCGGTGTTAACTGATGCTATCAAAGATGGTGTTGGACGTCCACGTCCGGATTTCTTCTGGCGTTGTTTCCCTGATGGAAAAGGGGTGTTTGATCTAGTAACACGAGATGTTAGGTGTACTGGAGATAAGAGTGTTATTAAGGAAGGGCACAAAAGTTTTCCAAGTGGACATACCTCTTGGTCCTTTGCTGGTCTTGGTTTTCTGGCATGGTATATTTCTGGAAAAATTAGGGTATTTGACCGTAGGGGCCATGTTGCAAAGCTTTGCATTGTTTTCTTACCACTTCTAGTGGCAGCTATGATTGCTGTTTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTTTTTGCTGGAGGGCTCATAGGTCTGCTGAAGTGTGGAACTTTTTTGTTTGATATATTAATAAACATATATACCTTTCTGAAGACTACTTATATGAACTTTAATGCAGGTTTGACTATTGCTTCCTTCTGTTACTTACAATTCTTTCCACCTCCATATGACACAGATGGTTGGGGACCTCGTGCATATTTCCAGATGTTGGCTGAATCTCTTGATGGCCCTCAAACTTCTATGAACAATGACGGTCTTCGTGCGCAATCTGCTGAGCTTCAGACTGTATCGGTGTATATCGCACCCCAACATGATGGTGATACTACAAGATTTTAG 1002 0.4112 MPETQLGTHTIRSHGAKVARVHMSDWLILLLLVIIDVVLNVIEPFHRFVGEGMLTDLRYPLQDNTIPFWAVPIIAILLPMAIIVVYYFIRKDVYDFHHAILGLLFSILITAVLTDAIKDGVGRPRPDFFWRCFPDGKGVFDLVTRDVRCTGDKSVIKEGHKSFPSGHTSWSFAGLGFLAWYISGKIRVFDRRGHVAKLCIVFLPLLVAAMIAVSRVDDYWHHWQDVFAGGLIGLLKCGTFLFDILINIYTFLKTTYMNFNAGLTIASFCYLQFFPPPYDTDGWGPRAYFQMLAESLDGPQTSMNNDGLRAQSAELQTVSVYIAPQHDGDTTRF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1477 333 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 327 IPR043216 GO:0006644
Lja2g1477 333 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 20 253 - -
Lja2g1477 333 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 1 327 - -
Lja2g1477 333 SMART acid_phosph_2 98 242 IPR000326 -
Lja2g1477 333 Pfam PAP2 superfamily 100 235 IPR000326 -
Lja2g1477 333 CDD PAP2_containing_1_like 55 235 - -
Lja2g1477 333 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 237 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1477 Lja-Chr2 14270097 14276527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1477 1 318 Lipid Metabolism Gene Families AT1G15080 69.811 2.41e-156 437
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1477 2 14270097 14276527 Lja2g1477 2 14270097 14276527 ECH
Lja2g1477 2 14270097 14276527 Lja1g2507 1 29062282 29066700 ECH