Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1464 ATGATCACAATTGCCTCGTTTGCTATTGTTTTTCTGTACAAACGTACTAACAAATCTTCAGGCTTCCAAAACCAACCAAGAAGCACTAATTCTGGTCCCTACAGAGGTATATCAAACCCAGAAAGTAGAGCTGTCTACTTTGGGATCCATGTGTTCTCCTATGAGGAGCTCCAACAGGCAACAAACAATTTTGATCAAGCTAGAGAGCTTGGAGAAGGAGGCTTTGGGACTGTTTACTATGGCAATCTTCAAGATGGACGTGAAGTTGCAGTGAAACGCCTATTTGAGCGCAACTACAGGCCAGTGGAATCATTCATCAATGAAATTCAGATACTCACACACATGCGACATAAATATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGTCGTGAGTTACTGCTAGTGTATGAATACGTCCCAAATGGCACTCTTAGTTGCCATCTCCACGGTGATAAGGCAAAGCATAACATATTGCCATGGCATGTGAGAATGAGAATTGCCATAGACACTGCTAGTGCATTGACTTATCTCCATGCTTCTGACATCATTCACCGAGACGTGAAGTCCAGCAACATCCTCATTGACAATTATTTTTGTGTTAAAGTTGCTGACTTTGGTCTTTCGAGATTATTCCCCAATGATGTCACACACGTCTCCACAGCTCCAAAGGGAACCCCAGGTTATGTTGACCCTGATTATCGCCTGTGCTACCAGCTTACAACAAAGAGTGATGTGTATAGCTTTGGAGTTGTTCTTGTTGAGCTAGTATCGTCTTTGCCAGCAGTTGACATGAGCAGGGAGAGGGATGAGATAAAGTTGGCAAATCTAGCCATAAGGAGGATTCAAACAAGGGCATTTTGTGAGCTGATTGATCCTTCCCTTGGTTTCCAGTCAAATGACAAGTTGAAAAGGGCGATAATTTCAGTGGCTGAATTGGCTTTTCAGTGTTTGCAAGGGGACAAGGATTTGAGACCCTCTATGAGTGAAGTGTTGGAGGTGCTTCAGAGAATTGAAAAAAGTAGAGCTGTCTACTTTGGGATCCCTGTGTTCTCCTATGAGGAGCTCCAACAGGCAACAAATAATTTTGATCAAGCTAGAGAGCTTGGAGAAGGAAGCTTTGGGACTGTTTACTACGCCAATCTTCAAGATGGACGTGAAGTTGCAGTGAAACGCCTATACGAGCGCAACTACTGGCCAGTGGAATCATTCAACAATGAAATTCAGATACTCACATGTATGCGAAATAAATATTTTGTGTCCCTTTATGGCTGCACTTCACGTCACAGTCGTGAGTTACTACTAGTGTATGAATATGTCCCAAATGGCACTCTCAGTTGCCATCTCCACGGTGATAAGGCAAAGCATAGAATATTGCCATGGCATGTGAGGATGAGAATTGCCATAGACACTGCTAGTGCATTGACTTATCTCCATGCTTCTGACATCATTCACCGAGACGTAAAGTCCAGCAACATCCTCATTGACAATAACTTTTGTGTTAAAGTTGCTGACTTTGGTCTTTCGAGACTATTCCCCAATGATGTCACACACGTCTCCACAGCTCCAAAGGGAACACCAGGTTATGTTGACCCTGATTATCGCATGTGCTACCAGCTTACAACAAAGAGTGATGTCTATAGCTTTGGAGTTGTTCTTGTTGAGCTAATATCATCTATGCCAGCAGTTGACATGAGCAGGGACAGGGATGAGATTAAGTTGGCAAATCTAGCCGTAAGGAGGATTCAAAGAAGAGCATTTTGTGAGTTGATTGATCCTTCCCTTGGTTTCCAGTCGGATGACAAGTTAAAAAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAGTGTTTGCAAGGGGACAATGAATTGAGACCCTCCATGAGTGAAGTGTTGGAGGTGCTGCAGAGAATTGAAAGTGAAAATGATGAGCCAGCGAGTTTTGAAGGAATTGAAATTCATGGTGCTAGGGTTCCACAAAGTTATACACGTCCACCACTTCCAAACATGAAGCTGCAGCGCCATCATCAAACACTATGA 2043 0.4332 MITIASFAIVFLYKRTNKSSGFQNQPRSTNSGPYRGISNPESRAVYFGIHVFSYEELQQATNNFDQARELGEGGFGTVYYGNLQDGREVAVKRLFERNYRPVESFINEIQILTHMRHKYLVSLYGCTSRHSRELLLVYEYVPNGTLSCHLHGDKAKHNILPWHVRMRIAIDTASALTYLHASDIIHRDVKSSNILIDNYFCVKVADFGLSRLFPNDVTHVSTAPKGTPGYVDPDYRLCYQLTTKSDVYSFGVVLVELVSSLPAVDMSRERDEIKLANLAIRRIQTRAFCELIDPSLGFQSNDKLKRAIISVAELAFQCLQGDKDLRPSMSEVLEVLQRIEKSRAVYFGIPVFSYEELQQATNNFDQARELGEGSFGTVYYANLQDGREVAVKRLYERNYWPVESFNNEIQILTCMRNKYFVSLYGCTSRHSRELLLVYEYVPNGTLSCHLHGDKAKHRILPWHVRMRIAIDTASALTYLHASDIIHRDVKSSNILIDNNFCVKVADFGLSRLFPNDVTHVSTAPKGTPGYVDPDYRMCYQLTTKSDVYSFGVVLVELISSMPAVDMSRDRDEIKLANLAVRRIQRRAFCELIDPSLGFQSDDKLKRMIVSVAELAFQCLQGDNELRPSMSEVLEVLQRIESENDEPASFEGIEIHGARVPQSYTRPPLPNMKLQRHHQTL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1464 680 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Lja2g1464 680 Gene3D Phosphorylase Kinase; domain 1 38 140 - -
Lja2g1464 680 ProSiteProfiles Protein kinase domain profile. 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1464 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 340 647 - -
Lja2g1464 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 342 - -
Lja2g1464 680 ProSitePatterns Protein kinases ATP-binding region signature. 70 92 IPR017441 GO:0005524
Lja2g1464 680 SUPERFAMILY Protein kinase-like (PK-like) 43 341 IPR011009 -
Lja2g1464 680 Gene3D Phosphorylase Kinase; domain 1 347 440 - -
Lja2g1464 680 SMART serkin_6 64 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1464 680 SMART serkin_6 364 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1464 680 ProSiteProfiles Protein kinase domain profile. 64 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1464 680 SUPERFAMILY Protein kinase-like (PK-like) 347 645 IPR011009 -
Lja2g1464 680 Pfam Protein kinase domain 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1464 680 Pfam Protein kinase domain 65 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1464 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Lja2g1464 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 342 IPR044652 -
Lja2g1464 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Lja2g1464 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 340 647 IPR044652 -
Lja2g1464 680 Gene3D Transferase(Phosphotransferase) domain 1 441 649 - -
Lja2g1464 680 Gene3D Transferase(Phosphotransferase) domain 1 141 346 - -
Lja2g1464 680 MobiDBLite consensus disorder prediction 660 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1464 Lja-Chr2 14146803 14153921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1464 345 675 Receptor kinase-like Gene Family AT1G25390 60.299 3.41e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lja2g1464 Pkinase 1.5e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1464 2 14146803 14153921 Lja2g1464 2 14146803 14153921 ECH