Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1462 ATGACTGGTAATGACCAAGCTTCTGGTTCTAGTCACAACATTAGGGGTTTAATCGCCAACGCCGGTGCCGGTGCCGCCGCGGGGGCAATAGCGGCTACATTTGTGTGTCCGTTGGATGTGATCAAGACTAGGCTACAAGTTCATGGCCTTCCTCCTTCGCAGAAAGGTAGTATCATTGTCTCGAGCTTGCAGAATATAGTGAGGGCTGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTAGCATTACTTCCTAACTGGGCAGTTTACTTCACAGTTTATGATCAACTAAAGGGCCGGCTTCGTTCACGTGATGGTTGTAACGAACTCACAACTATTGGAAATATTATAGCTGCTGCTGGTGCTGGGGTGGCAACAGCAATTTCTACAAATCCATTGTGGGTTGTTAAGACAAGACTCCAAACACAAGGAATGAGGTCTGATGTTGTTCCTTACAAGAGCGTTCTTTCTGCTTTGACAAGGATTGCACATGAGGAAGGCGTGCGAGGACTATATAGTGGCATTTTACCTTCATTGGCTGGCGTAAGTCATGTTGCAATTCAATTCCCAGCATATGAAAAGATCAAATTATACATGGCAGAAAAAGATAACACAACTGTTGACAAGCTAAGTCCTGGAAATGTTGCAATCGCGTCATCAATTTCAAAAATAACTGCCTCTTTATTGACTTATCCACATGAGGTAATACGTTCCAGGCTCCAAGAGCAAGGCATAGCCAAAAATAACGGGGTCCACTACGCAGGGGTTATTGATTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCGAGGCTTCTATCGCGGTTGCGCAACCAATCTATTGAGAACAACTCCATCTGCAGTTATTACATTCACCAGTTATGAGATGATACACAGGTTTTTGGATAGGGCTATACCTAAGGACAAGGGGTCTCCACAAGGAAGTTCTAAATCGAGTGAACTTAACAAGCCCCGGCAAGAAGCCGGTGACACTAACATAAAAAATGGCACTGATAGGGGACATTCACCTTCTCTCAGACTAACATGA 1056 0.446 MTGNDQASGSSHNIRGLIANAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPSQKGSIIVSSLQNIVRAEGFRGMYRGLSPTILALLPNWAVYFTVYDQLKGRLRSRDGCNELTTIGNIIAAAGAGVATAISTNPLWVVKTRLQTQGMRSDVVPYKSVLSALTRIAHEEGVRGLYSGILPSLAGVSHVAIQFPAYEKIKLYMAEKDNTTVDKLSPGNVAIASSISKITASLLTYPHEVIRSRLQEQGIAKNNGVHYAGVIDCTKKVFQKEGIRGFYRGCATNLLRTTPSAVITFTSYEMIHRFLDRAIPKDKGSPQGSSKSSELNKPRQEAGDTNIKNGTDRGHSPSLRLT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1462 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Lja2g1462 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Lja2g1462 351 Gene3D Mitochondrial carrier domain 4 108 IPR023395 -
Lja2g1462 351 Pfam Mitochondrial carrier protein 18 104 IPR018108 -
Lja2g1462 351 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Lja2g1462 351 Pfam Mitochondrial carrier protein 213 304 IPR018108 -
Lja2g1462 351 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 312 IPR044712 GO:0006862|GO:0055085
Lja2g1462 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Lja2g1462 351 MobiDBLite consensus disorder prediction 308 351 - -
Lja2g1462 351 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lja2g1462 351 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Lja2g1462 351 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Lja2g1462 351 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Lja2g1462 351 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Lja2g1462 351 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 11 312 - -
Lja2g1462 351 Gene3D Mitochondrial carrier domain 109 314 IPR023395 -
Lja2g1462 351 SUPERFAMILY Mitochondrial carrier 17 299 IPR023395 -
Lja2g1462 351 MobiDBLite consensus disorder prediction 314 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1462 Lja-Chr2 14138482 14143184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1462 33 323 Chloroplast and Mitochondria Gene Families AT1G25380 69.153 4.03e-143 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1462 2 14138482 14143184 Lja2g1462 2 14138482 14143184 ECH