Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1461 ATGGCCTCTCATGAAGGGAGGCGGCATCGTCATGCTCTTGTTCCTCTTGCTGCATTGCTTACTAGAGAGATGAAGGATGGGAAGATGGAGAAGCCCATTGTGAGGTATGGAGCAGTCTTTGATGGACACAATGGAAAATCTGCAGCCATTTTTACTAGGGAGCATTTGTTAAATCATGTGTTGGGTGCTCTCCCTCGAGGGCTTGGACGTGAGGAGTGGCTGCAACCTTTACCTCGGGCACTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTTCAGAAAAGAGGAGAAACTTCTAGTACCACTGCCACATTTGTTATAGTGGATAGGAGGACTCTAACAGTAACCTTGGTTGGAGATTACTGCTGTATACTAGATGCTCAGGGTGGTTCTGTTACTGACTTAACTGTTGATCATAGGCTCGAGGAGAATGTTGAAGAGAGGGAACGTGTTACGGCAAGTGGAGGTGAAGTCAGGAGGCTTAGCATTTTTGGTGATACTGAGATTGGTCCGCTTCGTTGCTGGCTTGGGGGTCTATGCCTTTCTAGATCAATACGAGATATGGACGTTGGGGAGTTTATAGTTCCAATACCATCTGTCAAACAAGTGACGGATGCTCTATCATCGGAAATGGCTGCAAAATCTTCTCGTGGTTTGCCTGTTGAACTTGCTGCAAAGCATGTTGTAAAGGAAGCAGTAAAAACTAGAGGGTTAAAGGATGATACAACTTGCATAGTCGTTGACATAATTACACCTGATAATGGATTGCCATCTCCATCTCTCCCCAAAAAGCAGAACAGGTTGAGGGCTCTTTTGTTTGGAAAGAGGTCCCGTGATTCTGCTGGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGGTCGGCAATGCTTGCTGAATGTGACGGCGTTTCAGTCCATGCAGGTTCCATTTTCTCCACTAGCTCGAAGCCATGGCAATGTCCTTTTCTATGTGCTGATTGTCGCAGTAAGAAGGATGCTACGGAAGGAAAACGCACTAGCGGAGTGAAAGTGTCATAG 1062 0.4576 MASHEGRRHRHALVPLAALLTREMKDGKMEKPIVRYGAVFDGHNGKSAAIFTREHLLNHVLGALPRGLGREEWLQPLPRALVAGFVKTDKEFQKRGETSSTTATFVIVDRRTLTVTLVGDYCCILDAQGGSVTDLTVDHRLEENVEERERVTASGGEVRRLSIFGDTEIGPLRCWLGGLCLSRSIRDMDVGEFIVPIPSVKQVTDALSSEMAAKSSRGLPVELAAKHVVKEAVKTRGLKDDTTCIVVDIITPDNGLPSPSLPKKQNRLRALLFGKRSRDSAGKLSKKLSAINIVEELFEEGSAMLAECDGVSVHAGSIFSTSSKPWQCPFLCADCRSKKDATEGKRTSGVKVS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1461 353 Pfam Protein phosphatase 2C 31 213 IPR001932 -
Lja2g1461 353 Gene3D - 2 253 IPR036457 -
Lja2g1461 353 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 38 - -
Lja2g1461 353 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 39 318 - -
Lja2g1461 353 SUPERFAMILY PP2C-like 36 249 IPR036457 -
Lja2g1461 353 PANTHER ALPHABET, ISOFORM E-RELATED 2 38 - -
Lja2g1461 353 ProSiteProfiles PPM-type phosphatase domain profile. 18 249 IPR001932 -
Lja2g1461 353 PANTHER ALPHABET, ISOFORM E-RELATED 39 318 - -
Lja2g1461 353 CDD PP2Cc 38 249 IPR001932 -
Lja2g1461 353 SMART PP2C_4 11 247 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1461 Lja-Chr2 14123148 14136070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1461 1 352 PP2C-type Phosphatase Gene Family AT1G68410 61.009 1.95e-169 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1461 2 14123148 14136070 Lja2g1461 2 14123148 14136070 ECH