Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1455 ATGCCACCACCACCACCACCTCTTCTCTCATCACTCTTCATTTTCTCACTCACCTTCCTCTCCCTCCTCCTCACTCCACAAGCCTCCACTCCCACCAACCCAGATTTCCACCCACTAATCTCCTTCAAAGCCACTTCCGACACCTCCAACAAACTCACCACATGGAACTCCACCACCCACCTCTGCACCTGGCACGGCGTCACCTGCCTCCGAAACCGCGTCTCCCGCCTCGTCCTCGAAAATCTCGACCTCCACGGCTCCCTCCACCCCTTAACCTCCCTCACTCAGCTCCGTGTCCTCAGCCTCAAAAACAACCGCTTCCACGGCCCCATACCAAACCTCTCCAACCTCACCGGCATGAGACTCCTCTTCCTCTCCCACAACAACTTCTCCGGTGACTTCCCCGTCACGCTCACCTCCCTCACCCGCCTCTACCGCCTTGACCTCTCCCACAACAGCCTCTCCGGCGAGATTCCGGCCGCCGTAAACAACTTCACGCGGCTCCTCACACTCCGCCTTGATGGTAACCAACTCCACGGCCGCATTCCGAACATGAACTTCCCCAACCTCCAAGACTTCAACGTCTCCGGTAACAATCTCTCAGGTCGAATACCCGTTTCTCTCTCGGGTCTCCCCGGTTCCGCTTTCGCTCAAAACCCGTCCCTCTGCGGCGCGCCGCTGCAGAAATGCAAAGACATCCCTGCCCTCGCTTCACCGCTGGTTCCATCTTCCCGGAGCTCCACGCCGGAAAACGAGAACCGGAGAACCGGAGCTACGAGAATGGGACCGATGCTTCTAATCGTAATTATCCTCGGCGACGCTCTGGTCCTCGCCGTGGTTTCTCTCCTTCTCTACTGCTACTTCTGGCGGCGACACAACTCCGGCGAGGTCAGGGAAGGGAAAGAGTCAACAGTATCGAGTAGTACTCCGAAGCGCGTGGAGGGTGGTGGTGGTGGTGGTCGTGGTGAGAAGGTGGTTTACGCGGCGGGGCAGAACGTGTTTGAGAAGGGTAGAATGGTGTTCTTCGAAGGAGTGAGGAGGTTTGAGCTGGAGGATCTTCTTCGTGCCTCGGCGGAGATGCTGGGGAAAGGTGGGTTCGGTACTGCCTATAAAGCTGTTCTTGATGATGGAAGTGTTCTTGCAGTGAAGAGGCTGAAGGAGGTTCAGATTGGAGGGAAGAGAGAGTTTGAGCAGAGAATGGAGGTTCTGGGAAAGTTGAGACACCCCAATGTTGTTTATTTAAGAGCTTACTATTTTGCTAGAGATGAGAAATTGCTTGTTTCTGATTACATGGCCAATGGTAGCTTGTTCTGGCTTCTTCATGGTAACCGAGGACCCGGGCGAACCCCATTGGACTGGACCACAAGGCTGAAGATAGCAGCCGGAGCGGCTCGAGGCGTAGCCTTCATTCACAGCCATAACCACCTCAACAGTAAAAACAATAGCCTCACCCACGGTAACATCAAATCCACCAACGTCCTAGTTGACAGGGCGGGAAATCCACGCGTGGCGGATTTTGGACTCTCCATCTTCGCGGCCCCGTCATCTACTGGGAGATTCAACGGTTACCGCGCACCGGAGGCCTCGGATGGCCGGAAACAGTCCTGGAAGTCTGACGTGTACTCCTTCGGCGTTTTGCTCATGGAGATGCTGACTGGGAAGTGCCCCTCCGCCCTGGACGGTGGCGGAGAGGCGGTGGACCTGCCCCGGTGGGTGCAGTCGGTGGTGAGGGAGGAATGGACGGCGGAGGTGTTTGATCTTGAGCTGATGAGGTATAAAGATATTGAGGAGGAGATGGTGGCGCTGCTGCAGATTGCCGTGGCGTGTACTGCAGCTGTACCTGATCAACGGCCTAGGATGAGCCACGTGGTGAAGATGATCGAGGAGTTGCGTGGGGTCCAGGTATCGCCGTGTCATGACACGGTGGACTCGGTGTCTGAGTCACCATCCCTGTCTGAAGATGCATGTGGAGGTGGAACTAACTAG 1986 0.5624 MPPPPPPLLSSLFIFSLTFLSLLLTPQASTPTNPDFHPLISFKATSDTSNKLTTWNSTTHLCTWHGVTCLRNRVSRLVLENLDLHGSLHPLTSLTQLRVLSLKNNRFHGPIPNLSNLTGMRLLFLSHNNFSGDFPVTLTSLTRLYRLDLSHNSLSGEIPAAVNNFTRLLTLRLDGNQLHGRIPNMNFPNLQDFNVSGNNLSGRIPVSLSGLPGSAFAQNPSLCGAPLQKCKDIPALASPLVPSSRSSTPENENRRTGATRMGPMLLIVIILGDALVLAVVSLLLYCYFWRRHNSGEVREGKESTVSSSTPKRVEGGGGGGRGEKVVYAAGQNVFEKGRMVFFEGVRRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVLAVKRLKEVQIGGKREFEQRMEVLGKLRHPNVVYLRAYYFARDEKLLVSDYMANGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHSHNHLNSKNNSLTHGNIKSTNVLVDRAGNPRVADFGLSIFAAPSSTGRFNGYRAPEASDGRKQSWKSDVYSFGVLLMEMLTGKCPSALDGGGEAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVALLQIAVACTAAVPDQRPRMSHVVKMIEELRGVQVSPCHDTVDSVSESPSLSEDACGGGTN* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1455 661 CDD STKc_IRAK 361 630 - -
Lja2g1455 661 ProSiteProfiles Protein kinase domain profile. 355 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1455 661 SUPERFAMILY L domain-like 52 222 - -
Lja2g1455 661 SUPERFAMILY Protein kinase-like (PK-like) 359 627 IPR011009 -
Lja2g1455 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 646 - -
Lja2g1455 661 MobiDBLite consensus disorder prediction 639 661 - -
Lja2g1455 661 MobiDBLite consensus disorder prediction 638 661 - -
Lja2g1455 661 Gene3D Transferase(Phosphotransferase) domain 1 431 645 - -
Lja2g1455 661 MobiDBLite consensus disorder prediction 238 257 - -
Lja2g1455 661 MobiDBLite consensus disorder prediction 240 255 - -
Lja2g1455 661 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Lja2g1455 661 MobiDBLite consensus disorder prediction 298 319 - -
Lja2g1455 661 Pfam Protein kinase domain 359 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1455 661 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Lja2g1455 661 PANTHER - 20 646 - -
Lja2g1455 661 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Lja2g1455 661 Gene3D Ribonuclease Inhibitor 32 91 IPR032675 -
Lja2g1455 661 Gene3D Ribonuclease Inhibitor 92 234 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1455 Lja-Chr2 14021902 14025118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1455 35 661 Receptor kinase-like Gene Family AT1G68400 61.422 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja2g1455 Pkinase 8.7e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1455 2 14021902 14025118 Lja2g1455 2 14021902 14025118 ECH