Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1452 ATGGAGGATCAAATCCGCAACCACACTAGAAGAGTAAACTCCAATTCCACCACGTGCTTAAAGCTCTTCGGCTTCAGCGTCCATGAAGACATGGACGACGAAGCCGCAGCGCTTGAAGACACGCCGGACTCACTACCAGTCAAGGCCACTTCCCCATCAGGCTCCTCTGACTCCGGCAACGGAGACGCCGCCGGCTCCGCCTCTGGCATAAACACTCCCTCCGGCGACCGGAAATACGAGTGCCAGTACTGCTGCCGAGAGTTTGCAAACTCCCAAGCCCTCGGCGGCCACCAGAACGCGCACAAGAAAGAGCGCCAGCAGCTCAAGCGCGCGCAGCTACAAGCCACGCGGAACGCCGCCGTATCCTTCGTCCGGAACCCGATCATCTCCGCCTTCGCGCCGCCGCCGCACCTGCTATCTCCCTCGGGAGCTATGATGGTGCCGGCGGGGACACCGTCGTGGGTGTACATGCCGCCACGTGGTGGCCCTCCTCCCTTCCACGTGTCGGTTTCGCACGGTTGCGTTTTCCCGTCGGCGAACGGTAACGGCGGCGTCAGTAACTGTAACGGTGGTGGTGGTAGCAACTTTAGCATTGTGACGAGCGCGAGATCCGCGGGTGCAGGAGCGATGTCGTACGTCGGCGGAGCAGGGGATTCTTCACCCACATTGTCAACGATGGGCTCGCATGTACAGGCCCGGCCCCACTATGGGAGGGTTGATGGGCCATCCATGAGTGGGTTCTCTGCGGGGCCCAGCTTTGATGATGGGTTCGGCTTGGATTTGCACCTGAGCCTAGCCCCACCCTGA 807 0.6134 MEDQIRNHTRRVNSNSTTCLKLFGFSVHEDMDDEAAALEDTPDSLPVKATSPSGSSDSGNGDAAGSASGINTPSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLSPSGAMMVPAGTPSWVYMPPRGGPPPFHVSVSHGCVFPSANGNGGVSNCNGGGGSNFSIVTSARSAGAGAMSYVGGAGDSSPTLSTMGSHVQARPHYGRVDGPSMSGFSAGPSFDDGFGLDLHLSLAPP* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1452 268 MobiDBLite consensus disorder prediction 46 74 - -
Lja2g1452 268 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Lja2g1452 268 PANTHER ZINC FINGER PROTEIN 5 13 267 IPR044299 GO:0010090
Lja2g1452 268 MobiDBLite consensus disorder prediction 34 74 - -
Lja2g1452 268 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Lja2g1452 268 MobiDBLite consensus disorder prediction 223 243 - -
Lja2g1452 268 Gene3D Classic Zinc Finger 63 126 - -
Lja2g1452 268 PANTHER ZINC FINGER PROTEIN GIS3 13 267 - -
Lja2g1452 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1452 Lja-Chr2 13994959 13996066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1452 13 267 C2H2 Transcription Factor Family AT1G68360 48.507 3.63e-55 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1452 2 13994959 13996066 Lja2g1452 2 13994959 13996066 ECH