Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1436 ATGGAGCTATCTATGAATACACAGAGCCTCTCACTACCCTTCAAATCTCTCATCAATCACTCTTTCAACCATCAACTACCCTTCACAACCAAGTTGATCACTAAACCCAGAACCACAAGACTCACTGTAACAGCAAGGAGGAAGGAACCCATTGAAGGGTTGAGCGATGATTTGAACGCTATAGCTTCTTATAACCTTGATTTTGCATACACTCGAAGAAAGGTTCGTGCAGCTTTTGCTGAGGTGCAGCAGCAGCTTGATCATTGCTTGTTCAAGAATGCTCCTGCTGCGATCAGAACTGAAGAATGGTATGAAAGGAATTCAAGGGGAATGGAAATTTTCTGCAAAAGCTGGATGCCAGAGCCTGGCATTCCAATCAAGGCCTCTGTGTGTTTCTGTCATGGATATGGTGATACTTGCACCTTCTTCTTTGAAGGTATAGCCAGGAGAATTGCTGCAGCTGGGTATGCTGTTTTTGCTATGGACTATCCAGGTTTTGGACTTTCAGAAGGATTGCATGGTTATATACCAAACTTTGATGATCTGGTTGATGATGTTATAGAGCATTATAGAAGAGTTAAAGCAAGGCCTGATCTGAGAGGTTTACCTAGATTTCTGTTGGGGCAGTCAATGGGTGGAGCAGTTTCTCTTAAAGTTCATCTTAAGGAGCCAAATAATTGGGATGGAGTGGTTCTTGTTGCACCAATGTGTAAAATTGCAGATGACGTGTTACCCTCAGATGCAATTATGAAGGTGTTAACTCTTTTGTCAAACGTGATGCCAAAAGCAAAACTCTTCCCAAACCAAGACCTAGCTGAGCTGGCCTTCAGAGAACCAAGTAAAAGAAATTTGGCTGTTTACAATGTTATATGTTACGAAGATAATCCACGACTGAAAACTGGCTTGGAACTTTTAAGGACTACAAAAGAAATTGAGTCACAAGTACAAAAGGTTTCAGCACCATTATTGATTCTTCATGGAGCAGCAGATAAGGTGACTGATCCATTAGTGAGTCAATTTCTTTATGAGAAAGCATCTAGCAAGGATAAGACTTTAAAGCTTTATGAAGATGGTTACCACTGTATTTTGGAAGGGGAACCTGATGACCGAATATTTGCTGTGCATGATGACATTATCTCATGGCTTGATTTTAGGTGTCAACTTAAGTGA 1170 0.4094 MELSMNTQSLSLPFKSLINHSFNHQLPFTTKLITKPRTTRLTVTARRKEPIEGLSDDLNAIASYNLDFAYTRRKVRAAFAEVQQQLDHCLFKNAPAAIRTEEWYERNSRGMEIFCKSWMPEPGIPIKASVCFCHGYGDTCTFFFEGIARRIAAAGYAVFAMDYPGFGLSEGLHGYIPNFDDLVDDVIEHYRRVKARPDLRGLPRFLLGQSMGGAVSLKVHLKEPNNWDGVVLVAPMCKIADDVLPSDAIMKVLTLLSNVMPKAKLFPNQDLAELAFREPSKRNLAVYNVICYEDNPRLKTGLELLRTTKEIESQVQKVSAPLLILHGAADKVTDPLVSQFLYEKASSKDKTLKLYEDGYHCILEGEPDDRIFAVHDDIISWLDFRCQLK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1436 389 PANTHER PHOSPHOLIPASE-RELATED 40 387 - -
Lja2g1436 389 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 40 387 - -
Lja2g1436 389 PRINTS Alpha/beta hydrolase fold signature 206 219 IPR000073 -
Lja2g1436 389 PRINTS Alpha/beta hydrolase fold signature 155 170 IPR000073 -
Lja2g1436 389 PRINTS Alpha/beta hydrolase fold signature 322 336 IPR000073 -
Lja2g1436 389 SUPERFAMILY alpha/beta-Hydrolases 80 383 IPR029058 -
Lja2g1436 389 Gene3D alpha/beta hydrolase 93 387 IPR029058 -
Lja2g1436 389 Pfam Serine aminopeptidase, S33 126 367 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1436 Lja-Chr2 13795325 13799817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1436 43 389 Acyl Lipid Metabolism Gene Families AT1G77420 63.401 7.10e-171 480
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1436 2 13795325 13799817 Lja2g1436 2 13795325 13799817 ECH