Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1428 ATGGATCTCAGAAATGCAGGTGGTAAAGCTTCTGCACATGCTGTTCTGCTGCTCAATAGCAACGGAATGGATGTACTTTACACGGGAACCTCTCTGACATACAAGATTATTGGAGGTGTATTTGATTTTTACTTCTTTTCTGGCCCTTCGCCTTTGAATGTTGTTGATCAATACACTTCCTTAATTGGAAGACCAGCTCCAATGCCTTACTGGGCTTTCGGTTTCCACCAATGCAGATACGGGTATCACAACTTATCAGTGGTAGAAGATGTTGTGGAGAATTACAAGAAGGCTCAAATCCCACTTGACGTGATCTGGAACGATGCTGATCACATGGATGGATACAAGGACTTCACTCTCAACCCAAGCAACTACCCTCGTCCAGAGCTTTTAAACTTCCTCAACAAGATACACAGGGTAGGAATGAAATACATTGTCATTATTGACCCTGGTATTGGTGTAAACTCCAGTTATAGTGTATACCAAAGAGGTATAGCTAATGATGTATTTATCAAGTATGAAGGTGAGCCTTACTTGGCTCAAGTTTGGCCAGGGCCAGTGAACTTTCCTGATTTTCTCAATCCAAAGACGGTTTCTTGGTGGGGTGACGAAATACGTCGCTTCCATGAACTTGTTCCTATTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCTCTGGAAAGTGCAAAATTCCTAAGGGAAAGGTGTGCCCTAGTGAAACAGGACCTTCTGTGGTTTGTTGTTTGGAGTGCGAGAACATTAACAAAACCCGATGGGACGATCCTCCCTACAAAATAAATGCCTCAGGAATACAAGCTCCTATTGGCCACAAGACAATAGCCACTAGTGCAGTCCACTATAATGGGATTTTGGAGTATGATGCTCACAGTATTTATGGTTTCTCTCAATCCATTGCAACTCACAAGGCCCTTCTAGGTCTTGAAGGCAAAAGGCCTTTTATTCTGTCGCGCTCAACTTATGTCGGTTCAGGCAAATATGCTGCACATTGGTCCGGTGACAATCAGGCTACATGGGAGAACTTGAGGTACTCAATATCCACCATGATAAATTTTGGTATATTTGGGGTCCCAATGATTGGCTCAGACATATGCGGGTTCTTTGCACAACCCACTGAAGAACTGTGCAGCAGATGGATTGAAGTAGGGGCTTTCTACCCTTTCTCAAGGGATCATTCTGACTACTACACCCCTAGACAGGAGCTTTACCTATGGAAATCAGTAGCTGAGTCTGCTAGAAATGCTTTGGGTATGAGGTACAAGATACTTCCATATCTTTACACTCTGAACTACGAGGCTCATGTCAGTGGAGCCCCAATTGCAAGACCTCTTTTCTTCTCATTTCCAACATACACTGAGTGCTATGGCCTTAGCACCCAGTTCTTGCTAGGAAGCAGTCTCATGATTTCTCCAGTGCTTGAGCCCGGCAAAACAGAGGTGAAAGCACTCTTCCCTCCTGGTAGCTGGTACAGCTTGCTGGATTGGACACAGACCATTACATCAAATGATGGAACATATGTTACCCTTGATGCTCCTCTGCATGTGGTGAATGTGCATTTATATCAGAATACCATTCTTCCAATGCAGCAGGGTGGATTGATATCTAAGGATGCTCGAATGACACCCTTCAGCCTCATCGTAACCTTCCCATCTGGGGCTGCTGAAGGGGAAGCGAAAGGGAACCTCTTCCTTGATGACGATGAACTACCAGAGATGAAGCTTGGAAATGGCTATTCCACCTACATTGATCTCCATGCAGCTGTCAAACAAGGTGGTGTGAGAGTTTGGTCAGAAGTTCAAGAGGGTAAGTTTGCATTGGATCAAGGTTGGGTTATTGAATCTATATCTGTGTTGGGATTGGGAGGAAGTGGAGCAGTGCATGCACTTGAGATAAATGGAATGCCTGTCTCTGATGTGAAAGTTAGTACATCTGAACATAAGCACTTGGATGGTCAGGCAAATGGAGAAAGTAAGACCGGGATGGTAGCATTGAAAAACTTGAACATCCCTCTTGGTGAAAACTTTGCTTTGACCTGGAACATGGGATGA 2076 0.4417 MDLRNAGGKASAHAVLLLNSNGMDVLYTGTSLTYKIIGGVFDFYFFSGPSPLNVVDQYTSLIGRPAPMPYWAFGFHQCRYGYHNLSVVEDVVENYKKAQIPLDVIWNDADHMDGYKDFTLNPSNYPRPELLNFLNKIHRVGMKYIVIIDPGIGVNSSYSVYQRGIANDVFIKYEGEPYLAQVWPGPVNFPDFLNPKTVSWWGDEIRRFHELVPIDGLWIDMNEVSNFCSGKCKIPKGKVCPSETGPSVVCCLECENINKTRWDDPPYKINASGIQAPIGHKTIATSAVHYNGILEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTYVGSGKYAAHWSGDNQATWENLRYSISTMINFGIFGVPMIGSDICGFFAQPTEELCSRWIEVGAFYPFSRDHSDYYTPRQELYLWKSVAESARNALGMRYKILPYLYTLNYEAHVSGAPIARPLFFSFPTYTECYGLSTQFLLGSSLMISPVLEPGKTEVKALFPPGSWYSLLDWTQTITSNDGTYVTLDAPLHVVNVHLYQNTILPMQQGGLISKDARMTPFSLIVTFPSGAAEGEAKGNLFLDDDELPEMKLGNGYSTYIDLHAAVKQGGVRVWSEVQEGKFALDQGWVIESISVLGLGGSGAVHALEINGMPVSDVKVSTSEHKHLDGQANGESKTGMVALKNLNIPLGENFALTWNMG* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1428 691 Gene3D glycosyl hydrolase (family 31) 1 64 - -
Lja2g1428 691 SUPERFAMILY Galactose mutarotase-like 7 51 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja2g1428 691 Gene3D Glycosidases 65 430 - -
Lja2g1428 691 PANTHER ALPHA-GLUCOSIDASE 1 691 - -
Lja2g1428 691 SUPERFAMILY Glycosyl hydrolase domain 448 528 - -
Lja2g1428 691 Pfam Glycosyl hydrolases family 31 44 535 IPR000322 GO:0004553|GO:0005975
Lja2g1428 691 PANTHER ALPHA-GLUCOSIDASE 1 691 - -
Lja2g1428 691 Gene3D - 431 530 IPR013780 -
Lja2g1428 691 SUPERFAMILY (Trans)glycosidases 54 446 IPR017853 -
Lja2g1428 691 Gene3D - 533 691 IPR013780 -
Lja2g1428 691 CDD GH31_MGAM_SI_GAA 63 443 - -
Lja2g1428 691 CDD GH31_N 12 63 - -
Lja2g1428 691 ProSitePatterns Glycosyl hydrolases family 31 active site. 216 223 IPR030458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1428 Lja-Chr2 13716930 13722228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1428 1 691 Glycoside Hydrolase AT1G68560 74.603 0.0 1122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1428 2 13716930 13722228 Lja2g1428 2 13716930 13722228 ECH